Query= MSMg01no425_i09.b1 MSMg01no425_i09.b1 CHROMAT_FILE:
MSMg01no425_i09.b1 PHD_FILE: MSMg01no425_i09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:46 2005
(502 letters)
>mm_chr6_136898291_136899192
Length = 902
Score = 847 bits (438), Expect = 0.0
Identities = 465/482 (96%), Gaps = 14/482 (2%)
Strand = Plus / Minus
Query: 5 gaattcctctaagatgcttttagatgggcaagtatctatgattttgtatcaagaagtaaa 64
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gaattcctctaagagggttttagatgggcaagtatctatgattttgtatcaagaagtaaa 416
Query: 65 actgacagggatatcattaaccaaaacacaaaaaaggaagtcaaggagaagtgtgtgtct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 actgacagggatatcattaaccaaaacacaaaaaaggaagtcaaggagaagtgtgtgtct 356
Query: 125 ggggggggggagttagggagactattgatagttacaatgtatatgattcacattcattaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ggggggggggagttagggagactattgatagttacaatgtatatgattcacattcattaa 296
Query: 185 gatatctatactctctggtttcaatggtaacattctagcacgtcagaactacagccccag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gatatctatactctctggtttcaatggtaacattctagcacgtcagaactacagccccag 236
Query: 245 aaaataaaccagaggttgcataaggtagtcattttttttt-------agggaaaacaaaa 297
||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 235 aaaataaaccagaggttgcataaggtagtca-------gtacagcagagggaaaacaaaa 183
Query: 298 gggatattatgaggctagagaacctggtacctgatatatagctgatgtacataccaagaa 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gggatattatgaggctagagaacctggtacctgatatatagctgatgtacataccaagaa 123
Query: 358 aagtagaccacaaagaaagaattataattttgttcctttaaaagtaaatttagtaagcat 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aagtagaccacaaagaaagaattataattttgttcctttaaaagtaaatttagtaagcat 63
Query: 418 agagtttaaaactccatgtgccatacatttctaatctttataacttttgatcctttctga 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 agagtttaaaactccatgtgccatacatttctaatctttataacttttgatcctttctga 3
Query: 478 ca 479
||
Sbjct: 2 ca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_i09.g1 MSMg01no425_i09.g1 CHROMAT_FILE:
MSMg01no425_i09.g1 PHD_FILE: MSMg01no425_i09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:46 2005
(245 letters)
>mm_chr6_136758448_136759092
Length = 645
Score = 466 bits (241), Expect = e-136
Identities = 244/245 (99%)
Strand = Plus / Plus
Query: 1 ttggtgctcatcttgaacgatgtataaaggtttgtcgtacctctgataaagaggcaggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttggtgctcatcttgaacgatgtataaaggtttgtcgtacctctgataaagaggcaggtt 260
Query: 61 gctcccactgacacctgaggagaacagactgcaatggtgttatgggcggtttcaggaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctcccactgacacctgaggagaacagactgcaatggtgttatgggcggtttcaggaggt 320
Query: 121 aaactttcataatacatttttggggggactaagttattttagaaccatgtcttaccatta 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 aaactttcataatacatttttggggggactaagttattttagaaccatgtcttagcatta 380
Query: 181 ggtgctcacattgagaagtactgttgacaaggactaagggtttgctcttgtgacttaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtgctcacattgagaagtactgttgacaaggactaagggtttgctcttgtgacttaagt 440
Query: 241 atagg 245
|||||
Sbjct: 441 atagg 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
