Query= MSMg01no425_n07.b1 MSMg01no425_n07.b1 CHROMAT_FILE:
MSMg01no425_n07.b1 PHD_FILE: MSMg01no425_n07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:09 2005
(504 letters)
>mm_chr6_65326873_65327776
Length = 904
Score = 851 bits (440), Expect = 0.0
Identities = 491/514 (95%), Gaps = 10/514 (1%)
Strand = Plus / Plus
Query: 1 aaacccaaaaaaaggataacctaaagacatcaacatgaagacatatgccctacaactgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aaacccaaaaaaaggataacctaaagacatcaacatgaagacatatgccctacaactgct 250
Query: 61 gctgtggcagggatggggatattttaaagagagactcaagctggctatcagattaccaaa 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 251 gctgtggcagggatggggatattttaaagagacactcaagctggctatcagattaccaaa 310
Query: 121 acaatggacatcaagaaactagaatttctccagcaaactcttgctgggagaagaaaaaag 180
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 acaatgggcatcaagaagctagaatttctccagcaaactcttgctgggagaagaaaaaag 370
Query: 181 aaacaaaatcctgggctagccagagattgacaacttgataacaaccttccacagagacat 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 371 aaacaaaatcctgggctagccagagattgacaactggataacaaccttccacagagacat 430
Query: 241 agatggtcaatggaggtcaggacaatgtgtggactagaggctgtttagttatgcattact 300
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 431 agatagtcaatggaggtcaggacaatatgtggactagaggctgtttagttatgcattact 490
Query: 301 ctgtcttcaacatctcatcaggatcctgagcacagactggggcttcattttccttcttca 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 491 ctgtcttcaacatctcatcaggatcctgatcacagactggggcttcattttccttcttca 550
Query: 361 caattggatgccattgaataactctcccttttctgctttttg----------gctcattt 410
|||||| |||||||||||||| ||||| |||||||||||||| ||||||||
Sbjct: 551 caattgaatgccattgaataattctccattttctgctttttgctattgtttggctcattt 610
Query: 411 aattaatttaactaggatggatgcttgaacctggcttttgggggcacacgttttgatcta 470
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 611 aattaatttaaataggatggatgcttgaacctggcttttgggggcacaggttttgattta 670
Query: 471 tgctggtaataccagcaaaacttatgaaagacaa 504
||||||||||||||||||||||||||||||||||
Sbjct: 671 tgctggtaataccagcaaaacttatgaaagacaa 704
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_n07.g1 MSMg01no425_n07.g1 CHROMAT_FILE:
MSMg01no425_n07.g1 PHD_FILE: MSMg01no425_n07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:09 2005
(479 letters)
>mm_chr6_65479823_65480701
Length = 879
Score = 911 bits (471), Expect = 0.0
Identities = 477/479 (99%)
Strand = Plus / Minus
Query: 1 tcacacttagctagtagtgaagttgcttatattgtggaagaaattggagggaaggaaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tcacacttagctagtagtgaagttgcttatattgtggaagaaattggagggaaggaaatt 620
Query: 61 tatacacctgtctcatttacagtaatggctcaagggaaatcacgaatgagagatctttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tatacacctgtctcatttacagtaatggctcaagggaaatcacgaatgagagatctttgg 560
Query: 121 ctacacatcatttggataaatcaaaagaaataaccaaagagctatagtttgagtttgagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ctacacatcatttggataaatcaaaagaaataaccaaagagctatagtttgagtttgagg 500
Query: 181 tattttttccatttcatgtttctgagaaaggtgttaaatcaggggacttttaacacctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tattttttccatttcatgtttctgagaaaggtgttaaatcaggggacttttaacacctgt 440
Query: 241 ttccttctaagaaatcattttgctttatatcagtcaagttttgctaccacagattctcca 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 439 ttccttctaagaaatcattttgctgtatatcagtcaagttttgctaccacagattctcca 380
Query: 301 tagttcagtcacatcagggtacctgcatttctttcatctgagaaaaatgtcacttggggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tagttcagtcacatcagggtacctgcatttctttcatctgagaaaaatgtcacttggggg 320
Query: 361 gcctcaattccaaatatttccaagtccagaaatcagggaccagcagcaggaaactcagtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gcctcaattccaaatatttccaagtccagaaatcagggaccagcagcaggaaactcagtg 260
Query: 421 tctttcaccctagttactagaaactacaatctgtagacagtattgaaaactttttccaa 479
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tctttcaccctagctactagaaactacaatctgtagacagtattgaaaactttttccaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space: 407561
Effective search space used: 407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
