Query= MSMg01no426_j19.b1 MSMg01no426_j19.b1 CHROMAT_FILE:
MSMg01no426_j19.b1 PHD_FILE: MSMg01no426_j19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:13 2005
(411 letters)
>mm_chr6_116871342_116872154
Length = 813
Score = 692 bits (358), Expect = 0.0
Identities = 397/410 (96%), Gaps = 4/410 (0%)
Strand = Plus / Minus
Query: 5 gaattccagaatgttccataaattctgtacactggtaaactccagtggatagtgtttgca 64
||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gaattccagaaagtactataaattctgtacactggtaaactccagtggatagtgtttgca 554
Query: 65 ggagaacatttatgaatgtcaggactagcggacagctgctctgaagctactggggtgttc 124
||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ggagaacgttcatgaacgtcaggactagcggacagctgctctgaagctactggggtgttc 494
Query: 125 tacacatggcctccaccttccaccttccaacctcttgaagacaattcaacacatgacttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tacacatggcctccaccttccaccttccaacctcttgaagacaattcaacacatgacttg 434
Query: 185 aaagttactatgcaatctcctccctctctcccagccaaatttgtttgaagaaatgtgaaa 244
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 433 aaagttactatgcaatctcctccctctcccccagccaaatttgtttgaagaaatgtgaaa 374
Query: 245 atagtggcaaagagctcatag-gggtaaaaggaaatcattggcaaatatctctcagtcac 303
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 373 atagtggcaaagagctcatagagggtaaaaggaaatcattggtaaatatctctcagtcac 314
Query: 304 ttcagtcat-tgagacgccccctggggctcctgttgggaagag-atcagtctttcctggg 361
||||||||| ||||||||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 313 ttcagtcatctgagacgccccctggggctcccgttgggaagagaat-agtctttcctggg 255
Query: 362 atgagaaagaaccatttgaaatgggtgggttttctcaagggctttcccac 411
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 atgagaaagaaccatttgaaatgggtgggttttctcaagggctttcccac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 813
Length adjustment: 9
Effective length of query: 402
Effective length of database: 804
Effective search space: 323208
Effective search space used: 323208
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_j19.g1 MSMg01no426_j19.g1 CHROMAT_FILE:
MSMg01no426_j19.g1 PHD_FILE: MSMg01no426_j19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:13 2005
(383 letters)
>mm_chr6_116660568_116661350
Length = 783
Score = 671 bits (347), Expect = 0.0
Identities = 374/383 (97%)
Strand = Plus / Plus
Query: 1 tcctgggaagcaatctgggctgatttatcagtgtttggagatgagactgctgtgtgagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctgggaagcaatctgggctgatttatcagtgtttggagatgagactgctgtgtgagat 260
Query: 61 gtcgtgagactccttggtaatcccaaggaaaatgtctcccactagaacagcatcttcctt 120
|| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 gttgtgagactccttggtaatcccaagaaaaatgtctcccactagaacagcatcttcctt 320
Query: 121 gggcgggctcagaaaacatctttttcttgctcttagctaggaatatatatgcttcttatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggcgggctcagaaaacatctttttcttgctcttagctaggaatatatatgcttcttatc 380
Query: 181 agcgttcaaaaatccatgtgtatatttgctgttccgaatggcagttttcttgatgctaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcgttcaaaaatccatgtgtatatttgctgttccgaatggcagttttcttgatgctaga 440
Query: 241 gaacaatgtgtgtgattccacagcatagatgccacacttcttcatgcaacctccaccttg 300
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 441 gaacaatgtgtgtgattccacagcatagatgccacgcttcttcatgcgacctccaccttg 500
Query: 301 ccggtcacaaggatgcctatgctccctgaagccttgggtgctgctgtgcagatgcacacc 360
||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||
Sbjct: 501 ccggtcacaaggatgcctacgctccccgaagccttgggtgctgctgtgccgatgcacacc 560
Query: 361 tgttttcttcagacaagggaaag 383
|||||| ||||||||| ||||||
Sbjct: 561 tgttttgttcagacaacggaaag 583
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 783
Length adjustment: 9
Effective length of query: 374
Effective length of database: 774
Effective search space: 289476
Effective search space used: 289476
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
