MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-427F03
Chromosome	6 (Build37)
Map Location	54,722,502 - 54,722,960
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC384386, 1200009O22Rik, Cpvl, LOC666305, Chn2, LOC100042056, Prr15, EG640926, Wipf3, Scrn1, Fkbp14, Plekha8, LOC100041292, 2410066E13Rik
Downstream gene	Znrf2, Nod1, A030007L17Rik, Gars, Crhr2, Inmt, C330043M08Rik, Aqp1, Ghrhr, Adcyap1r1, LOC100042219, Neurod6, LOC100041339
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC384386 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384386
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	1200009O22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66873 MGI:1914123
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cpvl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71287 MGI:1918537
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins

name	LOC666305 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666305
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 662 ESTs, 2 Proteins pseudo : _no_value

name	Chn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69993 MGI:1917243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042056 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042056
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Prr15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78004 MGI:1925254
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG640926 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:640926 MGI:3648076
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Wipf3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330319 MGI:3044681
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 43 ESTs, 3 Proteins

name	Scrn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69938 MGI:1917188
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fkbp14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231997 MGI:2387639
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Plekha8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231999 MGI:2681164
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041292 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041292
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	2410066E13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68235 MGI:1915485
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Znrf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:387524 MGI:1196246
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nod1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107607 MGI:1341839
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A030007L17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68252 MGI:1915502
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gars (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:353172 MGI:2449057
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crhr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12922 MGI:894312
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Inmt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21743 MGI:102963
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C330043M08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330323 MGI:3583959
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aqp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11826 MGI:103201
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ghrhr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14602 MGI:95710
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adcyap1r1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11517 MGI:108449
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100042219 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042219
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Neurod6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11922 MGI:106593
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041339 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041339
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	1200009O22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31541813 GeneID:66873 MGI:1914123
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1200009O22 gene transcript_id : NM_025817.3

name	Cpvl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94377379 GeneID:71287 MGI:1918537
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins product : carboxypeptidase, vitellogenic-like transcript_id : XM_984554.1

name	Chn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37574154 GeneID:69993 MGI:1917243
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chimerin (chimaerin) 2 transcript_id : NM_023543.1

name	LOC100042056 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255186 GeneID:100042056
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042056 transcript_id : XM_001477806.1

name	Prr15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328325 GeneID:78004 MGI:1925254
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proline rich 15 transcript_id : NM_030024.2

name	Wipf3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255188 GeneID:330319 MGI:3044681
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 43 ESTs, 3 Proteins product : WAS/WASL interacting protein family, member 3 transcript_id : XM_620310.4

name	Scrn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375297 GeneID:69938 MGI:1917188
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : secernin 1 transcript_id : NM_027268.2

name	Fkbp14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956365 GeneID:231997 MGI:2387639
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FK506 binding protein 14 transcript_id : NM_153573.1

name	Plekha8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47716513 GeneID:231999 MGI:2681164
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 transcript_id : NM_001001335.1

name	LOC100041292 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255137 GeneID:100041292
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : hypothetical protein LOC100041292 transcript_id : XM_001476111.1

name	2410066E13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377636 GeneID:68235 MGI:1915485
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2410066E13 gene transcript_id : NM_026629.3

name	Znrf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40255286 GeneID:387524 MGI:1196246
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc and ring finger 2 transcript_id : NM_199143.1

name	Nod1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361399 GeneID:107607 MGI:1341839
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleotide-binding oligomerization domain containing 1 transcript_id : NM_172729.2

name	A030007L17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803096 GeneID:68252 MGI:1915502
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A030007L17 gene transcript_id : NM_026637.3

name	Gars (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:93102416 GeneID:353172 MGI:2449057
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycyl-tRNA synthetase transcript_id : NM_180678.3

name	Crhr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801877 GeneID:12922 MGI:894312
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : corticotropin releasing hormone receptor 2 transcript_id : NM_009953.2

name	Inmt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385341 GeneID:21743 MGI:102963
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : indolethylamine N-methyltransferase transcript_id : NM_009349.2

name	C330043M08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382035 GeneID:330323 MGI:3583959
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C330043M08 gene transcript_id : NM_177883.3

name	Aqp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680709 GeneID:11826 MGI:103201
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aquaporin 1 transcript_id : NM_007472.1

name	Ghrhr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51100961 GeneID:14602 MGI:95710
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : growth hormone releasing hormone receptor transcript_id : NM_001003685.1

name	Adcyap1r1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70780367 GeneID:11517 MGI:108449
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adenylate cyclase activating polypeptide 1 receptor 1 transcript_id : NM_007407.3

name	Adcyap1r1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70780369 GeneID:11517 MGI:108449
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adenylate cyclase activating polypeptide 1 receptor 1 transcript_id : NM_001025372.1

name	LOC100042219 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255192 GeneID:100042219
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042219 transcript_id : XM_001478152.1

name	Neurod6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753129 GeneID:11922 MGI:106593
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neurogenic differentiation 6 transcript_id : NM_009717.1

name	LOC100041339 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255139 GeneID:100041339
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100041339 transcript_id : XM_001476194.1

name	1200009O22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313256 GeneID:66873 MGI:1914123
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC66873 protein_id : NP_080093.1

name	Cpvl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94377380 GeneID:71287 MGI:1918537
definition	codon_start : 1 product : carboxypeptidase, vitellogenic-like protein_id : XP_989648.1

name	Chn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37574155 CCDS:CCDS20154.1 GeneID:69993 MGI:1917243
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0019717 - synaptosome [Evidence ISS] GO_function : GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0005096 - GTPase activator activity [Evidence ISS] [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : beta chimaerin product : beta chimerin protein_id : NP_076032.1

name	LOC100042056 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255187 GeneID:100042056
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477856.1

name	Prr15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313412 CCDS:CCDS20155.1 GeneID:78004 MGI:1925254
definition	codon_start : 1 product : RIKEN cDNA E130201N16 protein_id : NP_084300.1

name	Wipf3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255189 GeneID:330319 MGI:3044681
definition	codon_start : 1 product : similar to CR16 protein_id : XP_620310.4

name	Scrn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38044104 CCDS:CCDS20156.1 GeneID:69938 MGI:1917188
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0016805 - dipeptidase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0006887 - exocytosis [Evidence ISS] [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : secernin 1 protein_id : NP_081544.1

name	Fkbp14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956366 CCDS:CCDS20157.1 GeneID:231997 MGI:2387639
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 product : FK506 binding protein 14 protein_id : NP_705801.1

name	Plekha8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47716514 GeneID:231999 MGI:2681164
definition	codon_start : 1 note : phosphoinositol 4-phosphate adaptor protein-2 product : pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 protein_id : NP_001001335.1

name	LOC100041292 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255138 GeneID:100041292
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476161.1

name	2410066E13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386116 CCDS:CCDS20158.1 GeneID:68235 MGI:1915485
definition	codon_start : 1 product : hypothetical protein LOC68235 protein_id : NP_080905.1

name	Znrf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40255287 CCDS:CCDS20159.1 GeneID:387524 MGI:1196246
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : zinc finger/RING finger 2 protein_id : NP_954594.1

name	Nod1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33563305 CCDS:CCDS20160.1 GeneID:107607 MGI:1341839
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008656 - caspase activator activity [Evidence ISS]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0042834 - peptidoglycan binding [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS]; GO:0004871 - signal transducer activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006919 - caspase activation [Evidence ISS]; GO:0042742 - defense response to bacterium [Evidence ISS]; GO:0016045 - detection of bacterium [Evidence ISS]; GO:0007249 - I-kappaB kinase/NF-kappaB cascade [Evidence ISS]; GO:0042228 - interleukin-8 biosynthesis [Evidence ISS]; GO:0007242 - intracellular signaling cascade [Evidence ISS]; GO:0043123 - positive regulation of I-kappaB kinase/NF-kappaB cascade [Evidence ISS]; GO:0051259 - protein oligomerization [Evidence ISS]; GO:0042981 - regulation of apoptosis [Evidence IEA] codon_start : 1 product : caspase recruitment domain 4 protein_id : NP_766317.1

name	A030007L17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311849 CCDS:CCDS20161.1 GeneID:68252 MGI:1915502
definition	codon_start : 1 product : hypothetical protein LOC68252 protein_id : NP_080913.1

name	Gars (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:93102417 GeneID:353172 MGI:2449057
definition	GO_component : GO:0030141 - secretory granule [Evidence IDA] GO_function : GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]; GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0045055 - regulated secretory pathway [Evidence IDA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA] codon_start : 1 note : storage granule protein 23 product : glycyl-tRNA synthetase protein_id : NP_851009.2

name	Crhr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753522 CCDS:CCDS20162.1 GeneID:12922 MGI:894312
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015056 - corticotrophin-releasing factor receptor activity [Evidence IDA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0005179 - hormone activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IDA]; GO:0016525 - negative regulation of angiogenesis [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : corticotropin-releasing factor 2; CRF 2 receptor product : corticotropin releasing hormone receptor 2 protein_id : NP_034083.1

name	Inmt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678281 CCDS:CCDS20163.1 GeneID:21743 MGI:102963
definition	EC_number : 2.1.1.49 GO_function : GO:0030748 - amine N-methyltransferase activity [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : aromatic alkylamine N-methyltransferase; arylamine N-methyltransferase; amine N-methyltransferase; nicotine N-methyltransferase; thioether S-methyltransferase product : indolethylamine N-methyltransferase protein_id : NP_033375.1

name	C330043M08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244500 GeneID:330323 MGI:3583959
definition	codon_start : 1 exception : unclassified translation discrepancy product : hypothetical protein LOC330323 protein_id : NP_808551.1

name	Aqp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680710 CCDS:CCDS20164.1 GeneID:11826 MGI:103201
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0015288 - porin activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]; GO:0015250 - water channel activity [Evidence TAS] GO_process : GO:0006810 - transport [Evidence IEA]; GO:0006833 - water transport [Evidence TAS] codon_start : 1 function : growth factor-induced delayed early response protein note : growth factor-induced delayed early response protein product : aquaporin 1 protein_id : NP_031498.1

name	Ghrhr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51100962 CCDS:CCDS20165.1 GeneID:14602 MGI:95710
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0004999 - vasoactive intestinal polypeptide receptor activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : growth hormone releasing hormone receptor protein_id : NP_001003685.1

name	Adcyap1r1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70780368 CCDS:CCDS20167.1 GeneID:11517 MGI:108449
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence TAS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0004999 - vasoactive intestinal polypeptide receptor activity [Evidence TAS] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS]; GO:0007165 - signal transduction [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : adenylate cyclase activating polypeptide 1 receptor 1 isoform 1 protein_id : NP_031433.3

name	Adcyap1r1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70780370 CCDS:CCDS20166.1 GeneID:11517 MGI:108449
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence TAS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0004999 - vasoactive intestinal polypeptide receptor activity [Evidence TAS] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS]; GO:0007165 - signal transduction [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : adenylate cyclase activating polypeptide 1 receptor 1 isoform 2 protein_id : NP_001020543.1

name	LOC100042219 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255193 GeneID:100042219
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478202.1

name	Neurod6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753130 CCDS:CCDS20168.1 GeneID:11922 MGI:106593
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : atonal homolog 2 product : neurogenic differentiation 6 protein_id : NP_033847.1

name	LOC100041339 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255140 GeneID:100041339
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476244.1

name	LOC384386 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384386
definition	number : 1 pseudo : _no_value

name	LOC384386 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384386
definition	number : 2 pseudo : _no_value

name	EG640926 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:640926
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:122693
definition	standard_name : 02.MMHAP15FLA2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:267136
definition	standard_name : MARC_10419-10420:999636317:1

name	(CDS detail)
type	STS
link
xref	UniSTS:130727
definition	standard_name : D6Mit185

name	(CDS detail)
type	STS
link
xref	UniSTS:130824
definition	standard_name : D6Mit277

name	(CDS detail)
type	STS
link
xref	UniSTS:179378
definition	standard_name : AV348454

name	(CDS detail)
type	STS
link
xref	UniSTS:165468
definition	standard_name : AI852905

name	(CDS detail)
type	STS
link
xref	UniSTS:86780
definition	standard_name : RH92407

name	(CDS detail)
type	STS
link
xref	UniSTS:235450
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:207960
definition	standard_name : BB343281

name	(CDS detail)
type	STS
link
xref	UniSTS:207961
definition	standard_name : BE457609

name	(CDS detail)
type	STS
link
xref	UniSTS:235449
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:235451
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:159511
definition	standard_name : AI448550

name	(CDS detail)
type	STS
link
xref	UniSTS:235452
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:159510
definition	standard_name : AU044205

name	(CDS detail)
type	STS
link
xref	UniSTS:167481
definition	standard_name : RH127066

name	(CDS detail)
type	STS
link
xref	UniSTS:207962
definition	standard_name : RH126672

name	(CDS detail)
type	STS
link
xref	UniSTS:179375
definition	standard_name : AA673177

name	(CDS detail)
type	STS
link
xref	UniSTS:141959
definition	standard_name : D13Sfk7

name	(CDS detail)
type	STS
link
xref	UniSTS:130936
definition	standard_name : D6Mit384

name	(CDS detail)
type	STS
link
xref	UniSTS:235453
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:179376
definition	standard_name : L02914

name	(CDS detail)
type	STS
link
xref	UniSTS:209562
definition	standard_name : Aqp1

name	(CDS detail)
type	STS
link
xref	UniSTS:143206
definition	standard_name : Ghrhr

name	(CDS detail)
type	STS
link
xref	UniSTS:142579
definition	standard_name : D6Jcs25

name	(CDS detail)
type	STS
link
xref	UniSTS:124621
definition	standard_name : 46.MMHAP28FRH10.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:272954
definition	standard_name : PMC315446P1

name	(CDS detail)
type	STS
link
xref	UniSTS:164324
definition	standard_name : AI846590

name	(CDS detail)
type	STS
link
xref	UniSTS:130869
definition	standard_name : D6Mit316

name	(CDS detail)
type	STS
link
xref	UniSTS:125713
definition	standard_name : U29086

name	(CDS detail)
type	STS
link
xref	UniSTS:179377
definition	standard_name : D44480

name	(CDS detail)
type	STS
link
xref	UniSTS:243902
definition	standard_name : BF386980

name	(CDS detail)
type	STS
link
xref	UniSTS:273364
definition	standard_name : PMC57740P1

name	(CDS detail)
type	STS
link
xref	UniSTS:141459
definition	standard_name : D0Nds23

name	LOC666305 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255185 GeneID:666305
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 662 ESTs, 2 Proteins product : similar to ribosomal protein pseudo : _no_value transcript_id : XR_033393.1

clone name	MSMg01-347I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270I02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-324P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263P02
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-427F03.T7 (MSMg01no427_f03.b1)	MSMg01-427F03.TJ (MSMg01no427_f03.g1)
ACC	AG520550	AG520551
length	739	797
length of high quality (start - end)	474 (52 - 525)	49 (77 - 125)
definition	CHROMAT_FILE: MSMg01no427_f03.b1 PHD_FILE: MSMg01no427_f03.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:49:09 2005	CHROMAT_FILE: MSMg01no427_f03.g1 PHD_FILE: MSMg01no427_f03.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:49:10 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TTTTTTTCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XCGCGGAATTCTTAAAACTCTTGTTTGTAAGAAAGTCGATCTGCTTTCTC AACTATGTCTGTGACAAAATAGTCCACCTCCGAAGATAGTTGCCTCTTAA AATTCTAAATGATGGCTGTTTCATGTTATCAATACTCCTGGAAGCTTGCT GGCTGTGCGCTGAATTACTTTTCTCAGTGTGATTAAAGTTTTATGGTCCA GGTGAGGAAGTTATAGGCAGAAATACGTACAAAGCCAAAGTAGATGTTAA AATGCCCACCGATTTCAGAAAAGAGCTGTCCTCGTTTGCTTTCTATTGAC GTGATAGGGACCACGAACAAAAGCAACTTGGGGAGGAAGGTTTATTTCAG GTGGACCTTGACATCATAGCCCATCAATCAATCAATCAATCAATCACAGA GGAACAGTGTTTACCTGGCCTGCACGGCCTGCTTTCTTATACCACACAGG ACCACCTGCCCAGGGGTGGCACTGCTCACAGGAGGCTGGGCCCTTCCACA TCAATCATCGATCCAGAAAATGTCCCCACAGATTGGTCTGTTGGAGGTAA TTTCTCAGTTGAGGGTCCTCTCTCCATGATATGTCCGACGTTTGTGTCAT AGTTGAACAAAACTAACTGCCCCACCCTTAGTTCCGGTTACCTTTGAAAT AAATAAATCCCGCTGAACCATTTTTGAAATTGACGCTCA	NCCATTGCTGTGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXACTTATGTGTAGATGTTCGCTGTT AAGTCATTGACAAGCAAATACAACCAATCCAGTAATCATTTAAAACCCAT TAATCCCCCAGAAGGTTTAGGTTAGTTAAAGAATAATTTTGGGGATAAAA AAAAATAAGTTCTTTCTTTTCTTCTTTTTTTTTCTCTTCTTTTTTCTTAA AAAGGGAAAACTAAAATTTTTGGGCTTTTTTTTTATAAAAACAAGGGGCG TGTCCCTTTTTTTAATTTTGGGGGGGGAGAATATTATCCCTCCCTCTGCG TTTGTGCAAATACGTTTATTCGCATGTTCCCTTCCTGGGGTTCTTTATTT TTCGGGGGGGGGCGTTCTTTCTCTCTTTCCCCCCCCTCCTTTGGGTTTTT TTTTTTTACGCCCCTCCTCTCAAAAAATTTTTTCTTTTTGTTTATATAAT ATCATTTTCTTTAGGGGGCGTTCTTCTTTCTTTTTTCTTCCCTCCCCGCA CAATCGCCACACTCTCTCTCCCCTTTTCTGTGGCGTTACTCCTCTTTCCC TTTTTTTTTTTTTATTTTTTTTTCCACTCCTCTTTTTTTTCTCCTCCCTT CCCCCTCTCTCTACCTCTTTTTTTGCCTTCTCTTCCTCTTCTTTTTCTTT TTCTCTCTTTCTCTCCTTTCTTCCTCTTTTCTCTCTTTCCTCTTNTCCTT TTTCTTTCTCCGTTTACTTCTCCCTTTCTCTTTCTCTCTCTCTTCTT
quality values	Open. Hide. 7 7 6 6 8 8 8 12 12 8 8 8 10 15 19 19 18 19 11 9 12 13 8 8 8 12 11 18 19 22 25 19 15 10 10 10 15 23 12 10 10 9 10 10 13 18 19 19 19 21 21 29 30 48 48 24 33 28 28 36 37 43 37 33 24 21 14 17 12 21 21 28 18 23 31 34 39 33 43 40 43 37 40 37 41 41 46 48 48 48 48 54 57 57 57 57 57 48 48 41 41 41 42 57 57 57 57 57 57 57 68 68 50 50 48 48 48 50 57 57 47 50 57 57 57 57 57 57 57 57 57 57 57 50 50 57 57 57 68 68 57 57 59 68 68 68 57 57 59 50 51 50 50 50 50 68 68 68 68 51 50 50 50 50 50 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 57 59 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 52 62 62 62 62 52 52 62 62 62 57 59 68 59 59 57 57 57 57 57 57 59 59 59 59 59 59 57 57 57 57 57 57 59 68 59 59 52 57 57 59 59 57 57 59 59 57 52 59 59 59 59 59 59 34 34 12 12 12 34 34 59 59 59 59 44 34 18 11 11 11 27 27 52 57 57 57 54 52 57 57 52 52 57 32 34 12 12 12 32 38 59 59 47 43 43 57 59 59 59 48 47 47 47 59 59 46 46 57 57 48 57 57 32 34 15 15 32 38 40 50 27 27 12 11 11 26 27 59 59 59 54 54 54 59 59 57 54 54 54 50 48 48 48 48 48 48 48 43 43 43 43 43 43 39 39 43 43 43 39 40 39 43 43 43 42 42 47 39 43 43 46 46 59 44 41 40 40 39 39 37 37 32 32 41 31 19 11 9 9 10 19 30 39 39 41 41 47 48 48 48 59 57 57 57 57 48 43 43 39 37 30 32 32 42 31 32 36 43 43 57 42 39 35 32 28 28 28 28 37 29 36 36 37 31 31 24 18 16 13 18 18 27 27 17 10 10 10 15 19 24 20 16 24 14 19 25 32 30 22 16 12 12 16 23 19 19 19 24 25 30 39 32 32 32 33 25 25 15 11 11 14 14 13 24 15 16 11 19 22 24 24 29 23 23 20 28 28 14 11 12 10 13 10 12 14 10 10 9 8 8 8 8 8 12 21 22 19 13 12 10 10 10 11 18 17 15 9 9 9 11 13 15 19 19 12 15 19 29 24 21 22 9 9 9 13 9 8 9 10 10 12 13 10 10 10 10 10 10 11 10 11 10 11 9 9 12 11 10 10 8 8 8 8 10 10 12 15 16 16 11 12 7 7 8 8 10 12 10 10 10 9 8 8 8 10 10 8 9 9 9 15 18 22 21 15 8 8 8 8 8 8 9 9 10 9 10 15 12 10 10 10 8 8 8 9 9 9 9 10 10 12 11 10 14 15 14 15 12 12 12 8 8 8 8 8 8 8 8 8 8 8 8	Open. Hide. 0 3 8 8 10 14 13 10 8 8 8 9 10 15 10 9 9 10 15 8 8 8 6 6 8 8 9 9 11 23 11 15 10 8 8 8 6 10 8 8 6 6 10 21 15 19 11 23 22 31 33 36 48 38 57 44 44 39 39 39 37 29 28 32 24 35 24 32 32 23 14 22 22 28 28 18 18 22 28 35 33 33 33 33 33 33 36 36 35 35 23 34 28 24 24 24 37 24 43 40 48 43 43 35 35 35 39 39 36 36 36 33 33 33 37 37 41 39 31 28 19 10 10 12 11 9 18 9 9 9 9 8 16 17 12 13 6 6 6 10 8 8 8 23 15 16 15 12 10 10 10 8 8 8 8 8 7 8 6 6 8 6 12 11 12 12 14 10 11 11 16 14 12 11 11 12 12 12 11 12 11 12 11 10 11 9 9 9 11 11 8 8 6 6 6 6 6 8 12 16 11 11 10 10 12 8 8 7 7 8 10 18 10 10 8 6 6 8 10 11 12 8 8 6 7 8 12 21 22 24 17 21 12 10 8 7 7 10 12 10 8 15 6 6 6 6 8 6 10 10 10 14 14 15 13 13 13 8 8 8 8 8 8 13 14 17 15 15 8 10 8 8 8 8 10 10 9 9 13 11 11 8 10 9 10 10 10 10 13 10 6 6 6 6 6 10 12 10 6 6 6 6 6 6 6 6 6 12 19 24 17 10 9 9 10 11 11 11 11 12 13 12 20 20 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 13 15 9 9 9 10 10 8 8 6 6 8 8 8 8 8 7 6 8 6 6 8 10 9 9 7 8 8 7 7 6 8 6 6 8 8 8 6 6 8 8 6 6 6 6 10 8 8 8 8 8 6 6 6 6 8 6 12 10 11 13 10 12 11 12 8 8 8 8 10 6 6 6 6 6 11 6 8 8 10 8 9 9 16 12 14 15 15 16 17 14 11 12 8 8 6 6 10 8 8 8 8 8 8 8 17 23 21 19 16 11 9 11 8 8 8 8 8 8 11 12 12 12 10 10 8 8 6 6 8 8 15 15 12 15 11 9 9 6 8 6 6 6 7 8 8 8 8 8 8 9 8 8 8 8 8 8 8 8 8 10 10 14 15 10 9 9 10 9 9 12 12 12 8 8 8 8 8 12 8 10 10 10 10 13 8 11 11 15 15 8 8 8 8 8 6 8 8 8 6 6 8 8 8 8 6 8 9 10 8 8 8 8 10 8 12 12 13 8 8 8 8 8 8 8 8 8 11 11 11 12 12 16 8 8 8 8 8 8 8 11 11 11 13 13 14 13 12 12 8 8 8 8 8 8 8 8 12 13 18 19 19 15 15 20 24 24 13 10 7 7 7 10 17 21 19 16 18 12 10 8 8 6 6 8 8 15 15 20 17 17 18 11 9 9 10 8 9 11 10 10 7 6 8 6 6 8 8 8 8 10 12 12 10 13 10 10 10 8 9 9 12 12 15 16 23 25 28 12 11 6 6 6 8 10 7 9 10 8 8 8 8 10 10 10 10 8 10 10 17 11 14 12 13 13 10 9 8 10 8 9 6 6 6 6 8 8 8 8 8 8 8 8 9 14 10 10 8 19 12 14 9 9 10 15 10 9 8 7 7 8 11 8 13 10 10 11 9 8 9 3 0 3 8 6 6 6 8 17 7 7 6 8 10 6 6 10 15 8 8 8 6 6 6 8 8 8 9 7 13 6 9 9 8 8 6 6 8 10 10 10 10 9 8 8 10 10 8 6 6 6 6 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no427_f03.b1 MSMg01no427_f03.b1 CHROMAT_FILE:
MSMg01no427_f03.b1 PHD_FILE: MSMg01no427_f03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:09 2005
         (474 letters)



>mm_chr6_54722298_54723171
          Length = 874

 Score =  793 bits (410), Expect = 0.0
 Identities = 450/468 (96%), Gaps = 10/468 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttaaaactcttgtttgtaagaaagtcgatctgctttctcaactatgtctgtgac 64
           ||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||
Sbjct: 205 gaattcttaaaactcttgtgtgtgagaaagtcgatctgctttctcaacgatgtctgtgac 264

                                                                       
Query: 65  aaaatagtccacctccgaagatagttgcctcttaaaattctaaatgatggctgtttcatg 124
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaatagtccatctccgaagatagttgcctcttaaaattctaaatgatggctgtttcatg 324

                                                                       
Query: 125 ttatcaatactcctggaagcttgctggctgtgcgctgaattacttttctcagtgtgatta 184
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 325 ttatcaatactcctggaagcttgctggctgtgcactgaattacttttctcagtgtgatta 384

                                                                       
Query: 185 aagttttatggtccaggtgaggaagttataggcagaaatacgtacaaagccaaagtagat 244
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagttttatggtccaggtgaagaagttataggcagaaatacgtacaaagccaaagtagat 444

                                                                       
Query: 245 gttaaaatgcccaccgatttcagaaaagagctgtcctcgtttgctttctattgacgtgat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gttaaaatgcccaccgatttcagaaaagagctgtcctcgtttgctttctattgacgtgat 504

                                                                       
Query: 305 agggaccacgaacaaaagcaacttggggaggaaggtttatttcaggtggaccttgacatc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agggaccacgaacaaaagcaacttggggaggaaggtttatttcaggtggaccttgacatc 564

                                                                       
Query: 365 atagcccatcaatcaatcaatcaatcaatcacagaggaacagtgtttacctggcctgcac 424
           |||||||||||||||||||||||        |||||||||||||||||||||||||||| 
Sbjct: 565 atagcccatcaatcaatcaatca--------cagaggaacagtgtttacctggcctgca- 615

                                                           
Query: 425 g-gcctgctttcttataccacacaggaccacctgcccaggggtggcac 471
           | ||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 616 gtgcctgctttcttataccacacaggatcatctgcccaggggtggcac 663


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space:   400896
Effective search space used:   400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information