Query= MSMg01no428_k15.b1 MSMg01no428_k15.b1 CHROMAT_FILE:
MSMg01no428_k15.b1 PHD_FILE: MSMg01no428_k15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:54 2005
(283 letters)
>mm_chr6_123043737_123044419
Length = 683
Score = 466 bits (241), Expect = e-136
Identities = 268/283 (94%), Gaps = 10/283 (3%)
Strand = Plus / Minus
Query: 1 ttatgccagccagaatgtctctatcacaggtactggcaatgctgagagaggctggtgaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ttatgccagccagaatgtctctatcacaggtactggcaatgctgagagaggctggtgaac 564
Query: 61 agcatctgatttatatgtaggcacctctgctatctttttgtcctgagttggagacccctt 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 agcatctgatttctatgtaggcacctctgctatctttttgtcctgagttggagacccctt 504
Query: 121 tacatgtaagtgcatttgcacatgcacacccaagaacatacacacacgtatgtgcataca 180
|||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 503 tacatgtaagtgcatttgca----------caagaagatacacacacgtatgtgcataca 454
Query: 181 ttaaaaacagaacaagacacatgagcattattcagaagtggtattatgagatgaaaaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ttaaaaacagaacaagacacatgagcattattcagaagtggtattatgagatgaaaaggg 394
Query: 241 tgttgtgatttttattttgctgtattacagttcttttgaatgt 283
||||||||| | ||||||| |||||||||||||||||||||||
Sbjct: 393 tgttgtgatatatattttgttgtattacagttcttttgaatgt 351
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no428_k15.g1 MSMg01no428_k15.g1 CHROMAT_FILE:
MSMg01no428_k15.g1 PHD_FILE: MSMg01no428_k15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:54 2005
(507 letters)
>mm_chr6_122886031_122886937
Length = 907
Score = 526 bits (272), Expect = e-153
Identities = 284/288 (98%)
Strand = Plus / Plus
Query: 220 atgagtgacttttaagcctttcgttttgtccagttgactcgaccggagagcgtagcaggt 279
||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 420 atgagtgacttttaagcctttcggcttgtccagttgacttgaccggagagcgtagcaggt 479
Query: 280 atcagcaacccacaactgaacaagtttttaattgcattacacttttcgaactttttttgc 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 atcagcaacccacaactgaacaagtttttaattgcattacacttttcgaactttttttgc 539
Query: 340 tgcaaaacagcaaaacacactcacatcactttctagttctacaaatttgaacagtttcta 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tgcaaaacagcaaaacacactcacatcactttctagttctacaaatttgaacagtttcta 599
Query: 400 atgtatttgaacaccccttggtgtcatgacccgcccccctctgggtcttgaatgcccgga 459
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 600 atgtatttgaacaccccttggtgtcatgacccgcccccctctgggtcttgagtgcccgga 659
Query: 460 ggggactgcaggctgtccaattaatggaaaacacgcctcacttttggt 507
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ggggactgcaggctgtccaattaatggaaaacacgcctcacttttggt 707
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
