Query= MSMg01no429_e19.b1 MSMg01no429_e19.b1 CHROMAT_FILE:
MSMg01no429_e19.b1 PHD_FILE: MSMg01no429_e19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:44 2005
(566 letters)
>mm_chr6_21786199_21787164
Length = 966
Score = 1087 bits (562), Expect = 0.0
Identities = 565/566 (99%)
Strand = Plus / Plus
Query: 1 atattaaagcctaccttgtttctgcagttaaagtcaaaacattattcaggtagtccctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atattaaagcctaccttgtttctgcagttaaagtcaaaacattattcaggtagtccctca 260
Query: 61 tccaagcagaaactgccaagacactgatggacattaactaaagagaagaaataaacaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccaagcagaaactgccaagacactgatggacattaactaaagagaagaaataaacaaac 320
Query: 121 ttgttaccagaaatgtctgcagcattcacttcaagatgaacaaccttaaatagaggattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgttaccagaaatgtctgcagcattcacttcaagatgaacaaccttaaatagaggattt 380
Query: 181 gttacataattttcatgtttttcctaataacatattggatttctattgaattttattagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttacataattttcatgtttttcctaataacatattggatttctattgaattttattagt 440
Query: 241 accataaatatctggctactccatttaataattatatatacccactaaatagaataccta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 accataaatatctggctactccatttaataattatatatacccactaaatagaataccta 500
Query: 301 tatacaggataaaaacaagtgacctcttaagttggtgacttcaagttcaatgcagaaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatacaggataaaaacaagtgacctcttaagttggtgacttcaagttcaatgcagaaatt 560
Query: 361 cccaagaataattcaatttgcaaatgtatgagacaaacctaaaactatcatctataaaag 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 561 cccaagaataattcaatttgcaaatgtatgagacgaacctaaaactatcatctataaaag 620
Query: 421 caaaaaggcgattagatgtggctactgaacaattacatgtcattaaaaggatcacaggag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caaaaaggcgattagatgtggctactgaacaattacatgtcattaaaaggatcacaggag 680
Query: 481 ctaccaaaaagattctactgactaaaattcaaacaaagagaacattagaataatagcaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctaccaaaaagattctactgactaaaattcaaacaaagagaacattagaataatagcaat 740
Query: 541 agcaatgactataatgatttgaaaca 566
||||||||||||||||||||||||||
Sbjct: 741 agcaatgactataatgatttgaaaca 766
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 966
Length adjustment: 10
Effective length of query: 556
Effective length of database: 956
Effective search space: 531536
Effective search space used: 531536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_e19.g1 MSMg01no429_e19.g1 CHROMAT_FILE:
MSMg01no429_e19.g1 PHD_FILE: MSMg01no429_e19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:44 2005
(511 letters)
>mm_chr6_21976275_21977184
Length = 910
Score = 911 bits (471), Expect = 0.0
Identities = 494/511 (96%), Gaps = 16/511 (3%)
Strand = Plus / Minus
Query: 1 tcattagtgaaatgggcacatactctttagagtcccagcacacacacacacacacacaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tcattagtgaaatgggcacatactctttagagtcccagcacacacacacacacacacaca 741
Query: 61 cacacacacacacacacacacacacacacacacacgcacacacccgcctcagacagtgta 120
|||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 740 cacacacacacacacacacacacacaca---------------ctgcctcagacagtgta 696
Query: 121 caaacactgtgccttgaaagttcctagatgagagtttgtttttctttctgggagtctttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 caaacactgtgccttgaaagttcctagatgagagtttgtttttctttctgggagtctttc 636
Query: 181 ctcaatctaaatatggtacagatactacttattcttgctaatcacaactgccatttaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 ctcaatctaaatatggtacagatactacttattcttgctaatcacaactgccatttaaag 576
Query: 241 ataaaaaaatccaatttattgtttataaatcttccgttctgaaactgtaagaaaagcaca 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 a-aaaaaaatccaatttattgtttataaatcttccgttctgaaactgtaagaaaagcaca 517
Query: 301 atgccttgaaataaattattcataaagacttcattgttgtaccttttaaccaaaagctgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 atgccttgaaataaattattcataaagacttcattgttgtaccttttaaccaaaagctgt 457
Query: 361 aagttgagaaaaagtacactgaacaaaatagttgagagaaaatatcttcaaagtattatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aagttgagaaaaagtacactgaacaaaatagttgagagaaaatatcttcaaagtattatt 397
Query: 421 aaatagttcccagctttggaaaactcatatacccagtgtggttcctatgaagatcaaaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 aaatagttcccagctttggaaaactcatatacccagtgtggttcctatgaagatcaaaca 337
Query: 481 ttcacaaagaagctgggcttgagggagaaac 511
|||||||||||||||||||||||||||||||
Sbjct: 336 ttcacaaagaagctgggcttgagggagaaac 306
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 70
Number of extensions: 28
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 910
Length adjustment: 10
Effective length of query: 501
Effective length of database: 900
Effective search space: 450900
Effective search space used: 450900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
