Query= MSMg01no429_f17.b1 MSMg01no429_f17.b1 CHROMAT_FILE:
MSMg01no429_f17.b1 PHD_FILE: MSMg01no429_f17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:49 2005
(532 letters)
>mm_chr6_28058570_28059500
Length = 931
Score = 1007 bits (521), Expect = 0.0
Identities = 527/529 (99%), Gaps = 1/529 (0%)
Strand = Plus / Plus
Query: 4 ggaattctataaaattgctcaagttatctagaggaaaacaagcagagattgaaagagata 63
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctataaaa-agctcaagttatctagaggaaaacaagcagagattgaaagagata 262
Query: 64 atggaggcagaggtataccagggccactctagtgcaaactggtgcttcgtcttggggaag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atggaggcagaggtataccagggccactctagtgcaaactggtgcttcgtcttggggaag 322
Query: 124 cacattcccctctgttggtctgaggaagtatctagggtgcattaaaaggagatcccagga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cacattcccctctgttggtctgaggaagtatctagggtgcattaaaaggagatcccagga 382
Query: 184 gttgacgcccctaagccttgtttggggtgcaatggtagttggtaaagtttgtactgatgc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gttgacgcccctaagccttgtttggggtgcaatggtagttggtaaagtttgtactgatgc 442
Query: 244 ccctaaagagcatttctcgaaggatacaggctgaattgacagtacacccaaagggcttct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ccctaaagagcatttctcgaaggatacaggctgaattgacagtacacccaaagggcttct 502
Query: 304 tgccaggacttagctaatcttctacttaagggatgttctctctaaggggaggtgctttat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tgccaggacttagctaatcttctacttaagggatgttctctctaaggggaggtgctttat 562
Query: 364 tcacattcttgttccaaaagcccagaacccttcttggtgtgtaacctgtgctagtgcaga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tcacattcttgttccaaaagcccagaacccttcttggtgtgtaacctgtgctagtgcaga 622
Query: 424 aacagaacgaaggagacttccataagggcctagtgtagatggagcaaggagaagcaggaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aacagaacgaaggagacttccataagggcctagtgtagatggagcaaggagaagcaggaa 682
Query: 484 gtgaaacatttgaagcagtgtccccagtactccaggagcatctagagct 532
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gtgaaacatttgaagcagtgtccccagtactccaggagcatctagagct 731
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 931
Length adjustment: 10
Effective length of query: 522
Effective length of database: 921
Effective search space: 480762
Effective search space used: 480762
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_f17.g1 MSMg01no429_f17.g1 CHROMAT_FILE:
MSMg01no429_f17.g1 PHD_FILE: MSMg01no429_f17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:49 2005
(363 letters)
>mm_chr6_28218969_28219731
Length = 763
Score = 663 bits (343), Expect = 0.0
Identities = 355/359 (98%)
Strand = Plus / Minus
Query: 1 atttttagcatttgggtggaatattctgttaatgttagatccatttcacttacgatgtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 atttttagcatttgggtggaatattctgttaatgttagatccatttcacttacgatgtca 328
Query: 61 tttcacatcaatattttcccccatatgacttattagtgagaaggagttattgaaatcacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tttcacatcaatattttcccccatatgacttattagtgagaaggagttattgaaatcacc 268
Query: 121 cgctatactctatgattttatatctaatagaattttttaataaaacttggtacttgtgtt 180
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 267 cgctatactctatgattttatatctaatagaatttttaaacaaaacttggtacttgtgtt 208
Query: 181 tggcccatcctttaatcagtataaactgaccctccttatttcttcttagtttgatttgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tggcccatcctttaatcagtataaactgaccctccttatttcttcttagtttgatttgaa 148
Query: 241 gtctgttttgtcagatactaaaatagctagacctacttatttttaatcccatttgcttgg 300
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 147 gtctgtcttgtcagatactaaaatagctagacctacttatttttaatcccattttcttgg 88
Query: 301 gatactcttttcttccatcatttcaccctaaggtggtgtctagtctgtaatgatggtga 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 gatactcttttcttccatcatttcaccctaaggtggtgtctagtctgtaatgatggtga 29
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 763
Length adjustment: 9
Effective length of query: 354
Effective length of database: 754
Effective search space: 266916
Effective search space used: 266916
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
