Query= MSMg01no432_d19.b1 MSMg01no432_d19.b1 CHROMAT_FILE:
MSMg01no432_d19.b1 PHD_FILE: MSMg01no432_d19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:53 2005
(440 letters)
>mm_chr6_62074759_62075598
Length = 840
Score = 586 bits (303), Expect = e-171
Identities = 361/383 (94%), Gaps = 10/383 (2%)
Strand = Plus / Minus
Query: 5 gaattcaatggcattcttggagatatcctgcccctcaatattatgtaaggacttttccat 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gaattcaatggcatccttggagatatcctgcccctcaatattatgtaaggacttttccat 316
Query: 65 gttttaaaaaatcatcccattatttttattttatcttatattcactctctctccctctgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gttttaaaaaatcatcccattatttttattttatcttatattcactctctctccctctgt 256
Query: 125 cttctctttttactctgcatgtcctttgcttaatatgatatatatgaagccatatattat 184
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 255 cttctctttttactctgcatgtcctttgcttaatatgatatgtatgaagccatatattat 196
Query: 185 agcttcccatttatagtttttatgggactcctgagagtgaacaagtgggtctctacttct 244
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 agcttcccatttatagattttatgggactcctgagagtgaacaagtgggtctctacttct 136
Query: 245 tgtgcttctattctctttgccttctttccttttccttcctcctcctcctcctcctcctcc 304
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 135 tgtgcttctattctctttgccttctttccttttcctt-ctccttctcctcctcctcct-- 79
Query: 305 tcctccttcttcttcttctcctccttctccttctccttctccttctttctccttctcctt 364
||||||||| || || |||||||| ||||| ||| | |||| || ||||| |||||
Sbjct: 78 tcctccttc-tc--ctcctcctcctcctcctcctcatcctcc-tc---ctcctcctcctc 26
Query: 365 ctccttctccttcttcttcttct 387
|||||||| ||||||||||||||
Sbjct: 25 ctccttcttcttcttcttcttct 3
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_d19.g1 MSMg01no432_d19.g1 CHROMAT_FILE:
MSMg01no432_d19.g1 PHD_FILE: MSMg01no432_d19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:53 2005
(414 letters)
>mm_chr6_62028404_62029217
Length = 814
Score = 785 bits (406), Expect = 0.0
Identities = 412/414 (99%)
Strand = Plus / Plus
Query: 1 ttgtcaaagaaggttttttttttaaatatataatgagttggtaatgttaaacatattctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgtcaaagaaggttttttttttaaatatataatgagttggtaatgttaaacatattctt 260
Query: 61 tgacttcatctactcaaaaggaatagaaattttccattctatataacttaaaatcctcca 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 tgacttcatctactcaaaaggaatagaaattttccattctatataacttgaaatcctcca 320
Query: 121 tgtctattatctctgccaattacagtctaatttctggcaagaatgaatggagtggtttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtctattatctctgccaattacagtctaatttctggcaagaatgaatggagtggtttta 380
Query: 181 ctttgcttagtgttatttactctaaactgctctatctttttgagagactggattaaaatt 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 ctttgcttagtgttatttactctaaactgctctatctttttgagagaccggattaaaatt 440
Query: 241 gggacaaaaatcaacagatctttttatagttgaaagcaaaggttcatgtcctgtacttat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggacaaaaatcaacagatctttttatagttgaaagcaaaggttcatgtcctgtacttat 500
Query: 301 tcaaagtagggcagcctcatttttttcttaatgggagactgacctaatgcaaaaactcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcaaagtagggcagcctcatttttttcttaatgggagactgacctaatgcaaaaactcca 560
Query: 361 ctaagattgtactgaggaatcaggtcaactggcaagaactctggtttctatgtg 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctaagattgtactgaggaatcaggtcaactggcaagaactctggtttctatgtg 614
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
