XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCGTAGCTCGCCGGAATTCA
TAGCAGCGGTGACAGAATAGAGGAGACCTGTGCAATCTCAAGCCAAACAA
AATCCCACTATAGAGAGGGAACGCAGGCATGAGTTCTCACTCCTAGCTAA
GCGCTATTGGAAATTTATACCTACTGGGAGAGCAAAAGTTTTTCTTTCTT
TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC
TTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT
CCTTCCTCCCTCCCTCCCTCCCTCTCCCTCTCTCCCTCCCTCCCTCCCTC
TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT
TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTCCTTCCTT
CCTTCCTTTCTTTCATTCCTCCTCCTTCTTCCCCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTTTCTCCCTTCCTTCCGCCCGGTGTGCT
CTCCTCTGTCTCGTGGCCGGCCTCCTTCTTTCGGGCGTTCGTTCCGCCTC
CTCTTGGTCCTTCGTCTTTTTTTTTTTGGTCCCGCGCTGTTCGCTGGCTT
GTCNTGCCTTGTTTTCCCCTTCGGTGCGTGCTTCTTCCCTGTTTTTTGTT
TCCTTTTTGCGCTGGGGTTCTCCGTTCTTTTCTGTTTGTTGTGCCCCCCT
TGTCTTGCTCTCCTTCTCCCCCTTCG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTCTAGAATAGCCACTTAAAGGAGACCAAAAATG
AAGTAGGTTTGTGTTTTCTCCTATTATGATGCAATAAAAATTCTGATAGT
TTCAAAGTATGAAATGAAAAATAATTGGTTTAAAGCAACAGAAGTCAAAT
CCATAGTCATATGAAGACAAATTATAAAACCATCCTTACTAATTGAGAAA
AATGACAAATACAACACCAAACATGATAAACCACAGATACTGATGAACCA
GTAGAGATCAAAGAATATAGTTGCAGAATGCCTTAGAAAATGTAAGAATT
ACATGGAACTCTATTTCCCCTTCCCACAGAAGTCCATGCATGCCTCCTAA
CATCTTTGGGTCTACAGATTGTAGTATGGTTATCATTTACTTAATGGGTA
ATATCTACTTATAAATGATTACCTACAATATTTGTTCTGCGAGGTCTGAG
TTACCTCGCTCAGGATACTGCTTTGCTTTGTTTTTTGCTTGTTGCATCCA
TTCCCTTGCAGATTTCATGATGTCATTTTTTTAACAGTTGATTAAGACTT
CATTGTGTATATATACCACATTTTCTTTCTCCATTCTTCAGTTGTGGGAC
ATCTAGGTTATTTCCAGGTTCTAAGTATTATGAAAAAAGCTGCCATGAAC
ATAATTTGAGAAGAATCCCTTCTGGAAAGATAAAGTGCCCTTTGGGTTAT
AGGCCATAAATGGTTAAAG

Query= MSMg01no432_l02.g1 MSMg01no432_l02.g1 CHROMAT_FILE:
MSMg01no432_l02.g1 PHD_FILE: MSMg01no432_l02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:31 2005
         (514 letters)



>mm_chr6_14484638_14485552
          Length = 915

 Score =  897 bits (464), Expect = 0.0
 Identities = 503/516 (97%), Gaps = 4/516 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctagaatagccacttaaaggagaccaaaaatgaagtaggtttgtgttttctcctattat 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 tctagaatagccacttaaaggagaccaaaaatgaagtaggtttgtgttttctcctactat 260

                                                                       
Query: 61  gatgcaataaaaattctgatagtttcaaagtatgaaatgaaaaa-taattggtttaaagc 119
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 gatgcaataaaaattctgatagtttcaaagtatgaaatgaaaaaataattggtttaaagc 320

                                                                       
Query: 120 aacagaagtcaaatccatagtcatatgaagacaaattataaaaccatccttactaattga 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacagaagtcaaatccatagtcatatgaagacaaattataaaaccatccttactaattga 380

                                                                       
Query: 180 gaaaaatgacaaatacaacaccaaacatgataaaccacagatactgatgaaccagtagag 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaaaatgacaaatacaacaccaaacatgataaaccacagatactgatgaaccagtagag 440

                                                                       
Query: 240 atcaaagaatatagttgcagaatgccttagaaaatgtaagaattacatggaactctattt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcaaagaatatagttgcagaatgccttagaaaatgtaagaattacatggaactctattt 500

                                                                       
Query: 300 ccccttcccacagaagtccatgcatgcctcctaacatctttgggtctacagattgtagta 359
           ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 501 ccccttcccacagaagtccatgcatccctcctaacatctttgggtctacagattgtagca 560

                                                                       
Query: 360 tggttatcatttacttaatgggtaatatctacttataaatgattacctacaatatttgtt 419
           ||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||
Sbjct: 561 tggttatcatttacttaatgggtaatatctacttatatatgattacataccatatttgtt 620

                                                                       
Query: 420 ctgcgaggtctgagttacctcgctcaggatactgctttgctttgttttttgcttgttgca 479
           ||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||
Sbjct: 621 ctgcgaggtctgagttacctccctcaagatactgctttgctttgttttttgct-gttgca 679

                                               
Query: 480 tccattcccttgcag-atttcatgatgtcatttttt 514
           |||||| |||||| | ||||||||||||||||||||
Sbjct: 680 tccatttccttgc-gtatttcatgatgtcatttttt 714


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 915
Length adjustment: 10
Effective length of query: 504
Effective length of database: 905
Effective search space:   456120
Effective search space used:   456120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)