Query= MSMg01no432_m10.b1 MSMg01no432_m10.b1 CHROMAT_FILE:
MSMg01no432_m10.b1 PHD_FILE: MSMg01no432_m10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:38 2005
(179 letters)
>mm_chr6_108696471_108697048
Length = 578
Score = 325 bits (168), Expect = 1e-93
Identities = 174/176 (98%), Gaps = 1/176 (0%)
Strand = Plus / Plus
Query: 1 cctgacaataatggccatgttcttgaccatcacaaactgcctctggttatgtatactaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgacaataatggccatgttcttgaccatcacaaactgcctctggttatgtatactaaa 260
Query: 61 gtctttatgagggattttaattttttaaattgcatttacttatttatatatggtaggagt 120
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 gtctttatgagggattttaatttttt-tattgcatttacttatttatatatggtaggagt 319
Query: 121 ggcacaccagtggagatcatagaacaactcatgggagttgttgttgttttttgttt 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ggcacaccagtggagatcatagaacaactcatgggagttgttgttgttttttgttt 375
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 578
Length adjustment: 8
Effective length of query: 171
Effective length of database: 570
Effective search space: 97470
Effective search space used: 97470
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no432_m10.g1 MSMg01no432_m10.g1 CHROMAT_FILE:
MSMg01no432_m10.g1 PHD_FILE: MSMg01no432_m10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:38 2005
(374 letters)
>mm_chr6_108842778_108843551
Length = 774
Score = 716 bits (370), Expect = 0.0
Identities = 374/376 (99%), Gaps = 2/376 (0%)
Strand = Plus / Minus
Query: 1 attcctatcattgaaaccctctctgcctaatgtgagtgtggcagtgattctaccatgtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 attcctatcattgaaaccctctctgcctaatgtgagtgtggcagtgattctaccatgtcc 450
Query: 61 cttatggaaggaagcagagacgaaactctgctgtttggacaccaacactttgttccctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 cttatggaaggaagcagagacgaaactctgctgtttggacaccaacactttgttccctcc 390
Query: 121 ctccccgcccaccatgttctcctaacagaccttgcttggcacagcaaatctttatggctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ctccccgcccaccatgttctcctaacagaccttgcttggcacagcaaatctttatggctc 330
Query: 181 caaatttgctcaaaccaagtgatttatcagaagcagcacctacataaatgtattgaggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 caaatttgctcaaaccaagtgatttatcagaagcagcacctacataaatgtattgaggga 270
Query: 241 aaaatataaactattagtaaactactgctcactccgagcacttcatactgtctgtggggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aaaatataaactattagtaaactactgctcactccgagcacttcatactgtctgtggggg 210
Query: 301 tgtgtatgaatgcatatgtgtgtacatatgcatatagtgt--acacacacacacacgtat 358
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 209 tgtgtatgaatgcatatgtgtgtacatatgcatatagtgtacacacacacacacacgtat 150
Query: 359 tcgtgtgcacacacac 374
||||||||||||||||
Sbjct: 149 tcgtgtgcacacacac 134
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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