XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAGT
GATTCCTAAGTGGGAAACTGGTGTTCGAGAGGTAAGGGTGAGCACAGGTG
AAATCACATCTGAGGGAAAAGGGCCAGCCCCACTCAGCTTACCTACTGTG
GGCAAGGACAGAATGGTGGCACTGGGTGTGCTAGTGATTGGTAAGGTAGA
GGATTATTGTGTCAGGCGTGGAATCTTTTACCAGAGGATATCATTATTAT
CACCATCATCACAATCACCATCATTACCATCATCATCATCATCATCAACT
TTTGTGTTTTTTAGGAAACTGAAACCAGGGTCTTGAACATGCTAAGCAAA
TGCTTTGCCATCAAGCTACGTGCCCAATCCACCCAGAAGACTTTTTTTCC
TTTTTAAAATACACTTTAAAATATTTTGAAATGATAATATAATTACAGTT
CCTTCTTCCATTTTCTTCCTCTAGTCCTTACTATGTGTCTCCCTCAACAC
ATGCTCTCTGTCAAATTCATGGTTTCTTTTTCTTCACCTGCTGTTAAAAA
TATTACCTTAATCTTTATAATACCACCCTGCTCCCCCTGTGGAAGGTTTT
GGTTGACGGTCACCCCTGCTCTTTTCCACACTCTTCCCATTTTTCTCCCT
TTCCCGGGCGAAAGGATTTCTTCTCCCCCCACTTTTCCCCTCTCCCTAAA
TTTCGCCCGCCCCTTTACTCATTCTCACCTCCACTTTCCGGTCTCCCCCT
CCCCAATTCACGTTTTCTT

NCCCCGCCCNNNNNNCCNNNTTCCAACCCCNNNNNNNNNNNNNNTTTCCC
NNCCCCCCNNNNNNNNCCCNNNNNNNNNCCCCCCCNNNNCNCCCCCCCCC
TTTTGTGTTCCTTTTTTCGGTGCTGGGCCCAGGGGCTCNCNCCCNNCCCC
CCNNNNCCCCCCCCCCCCCCCCCCCCCCNCCCCCNCCCCCCCCCCCCCCC
CNCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCNCCCCNNNNNNNNCTTCTTTTCCCCCNCCCCCCCCCCCCCCCCCCCCC
CCCCCCCTNCCNCCCTCCCCCNTCCCTCCCCCCCNNCCCCCCCNCCCTCC
CCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCCCCCCCCCC
CCCCCCCCCTCCCTNCCTCTCCNTCCCCCCCCCCCTCTCCCTCTTTCCCC
CCCCCCTCCCTCCCCCCCNCCCCCCCCCCCCCCCCTCCCCCCCCCCCTCT
CCCCTTCTTCTCCCCCCCCTCCTCCCCTTCCCCCCCCCCCCNCTCCCTTT
TCCCCCCCCCCCCCCCCCCCTCCCCCCCCTTCCCCCCCCCCCTCCCTCCC
CCCCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCTTCCCCCNTTTC
CCCTCCTTCCCCCTTNCCCCCCTTTTCCCCCCCCTCCC

Query= MSMg01no433_k15.b1 MSMg01no433_k15.b1 CHROMAT_FILE:
MSMg01no433_k15.b1 PHD_FILE: MSMg01no433_k15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:49 2005
         (449 letters)



>mm_chr6_73432863_73433711
          Length = 849

 Score =  785 bits (406), Expect = 0.0
 Identities = 441/458 (96%), Gaps = 9/458 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgggaaactggtgttcgagaggtaagggtgagcacaggtgaaatcacatctgagggaaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggaaactggtgttcgagaggtaagggtgagcacaggtgaaatcacatctgagggaaaa 260

                                                                       
Query: 61  gggccagccccactcagcttacctactgtgggcaaggacagaatggtggcactgggtgtg 120
           ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 261 gggccagccccactcagcttacctactgtgggcaaggacagaatgatggccctgggtgtg 320

                                                                       
Query: 121 ctagtgattggtaaggtagaggattattgtgtcaggcgtggaatcttttaccagaggata 180
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctagtgattggtgaggtagaggattattgtgtcaggcgtggaatcttttaccagaggata 380

                                                                       
Query: 181 tcattattatcaccatcatcacaatcaccatcattaccatca---------tcatcatca 231
           ||||||||||||||||||||||||||||||||||||||||||         |||||||||
Sbjct: 381 tcattattatcaccatcatcacaatcaccatcattaccatcaccatcatcatcatcatca 440

                                                                       
Query: 232 tcatcaacttttgtgttttttaggaaactgaaaccagggtcttgaacatgctaagcaaat 291
           |||||||||||||||   |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcatcaacttttgtgcagtccaggaaactgaaaccagggtcttgaacatgctaagcaaat 500

                                                                       
Query: 292 gctttgccatcaagctacgtgcccaatccacccagaagactttttttcctttttaaaata 351
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctttgccatcaagctacgtgcccaatccacccagaagactttttttcctttttaaaata 560

                                                                       
Query: 352 cactttaaaatattttgaaatgataatataattacagttccttcttccattttcttcctc 411
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cactttaaaatattttgaaatgataatataattacagttccttcttccattttcttcctc 620

                                                 
Query: 412 tagtccttactatgtgtctccctcaacacatgctctct 449
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tagtccttactatgtgtctccctcaacacatgctctct 658


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space:   368321
Effective search space used:   368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)