Query= MSMg01no433_o18.b1 MSMg01no433_o18.b1 CHROMAT_FILE:
MSMg01no433_o18.b1 PHD_FILE: MSMg01no433_o18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:09 2005
(221 letters)
>mm_chr6_112297210_112297830
Length = 621
Score = 402 bits (208), Expect = e-117
Identities = 217/220 (98%)
Strand = Plus / Plus
Query: 1 gaggaaaggacacaattcagtccagcactactttaacatggtggatccttgaagacttaa 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagggaaggacacaattcagtccagcactactttaacatggtggatccttgaagacttaa 260
Query: 61 ggtaagagaacaattcagacactaaaatgcagatacattgtaaatcatcgcagtgaccaa 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 ggtaagagaacaattcagacactaaaatgcagatacattgtaagtcatcgcagtgaccaa 320
Query: 121 gtacatagagacagaaggtaggacagatgctatcattggggaatgacgcagtgggaaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtacatagagacagaaggtaggacagatgctatcattggggaatgacgcagtgggaaggt 380
Query: 181 atttctgattagggacaaggttccagctcaagttggtgaa 220
|||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 atttctgattagggacaaggttccagttcaagttggtgaa 420
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 221
Length of database: 621
Length adjustment: 9
Effective length of query: 212
Effective length of database: 612
Effective search space: 129744
Effective search space used: 129744
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no433_o18.g1 MSMg01no433_o18.g1 CHROMAT_FILE:
MSMg01no433_o18.g1 PHD_FILE: MSMg01no433_o18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:09 2005
(174 letters)
>mm_chr6_112417605_112418179
Length = 575
Score = 286 bits (148), Expect = 4e-82
Identities = 172/188 (91%), Gaps = 14/188 (7%)
Strand = Plus / Minus
Query: 1 tttctttcctgcttatgatgctcgtcccttctatgaggattt----ttgttgtttt---- 52
|||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 427 tttctttcctgcttatgatgcttgtcccttctatgaggattttttgttgttgtttttttt 368
Query: 53 ------ttttgtttttaaattaccatttcttctcagaaattatttggcacccacacttga 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gttttgttttgtttttaaattaccatttcttctcagaaattatttggcacccacacttga 308
Query: 107 gttatttcctgggatcatctttgagaggcgaatgtgtggcaactggtttcttttctttga 166
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 307 gttatttcctgggatcatctttgagaggtgaatgtgtggcaactggtttcttttctttga 248
Query: 167 agcagcaa 174
||||||||
Sbjct: 247 agcagcaa 240
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 174
Length of database: 575
Length adjustment: 8
Effective length of query: 166
Effective length of database: 567
Effective search space: 94122
Effective search space used: 94122
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
