XXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATCCGCGGAATTCCTCAC
AGGTGGCACCAATGCAAATATCTCACACTGAGATACTCTTTTACATTGTG
TCAAGTTCACAATTAAAATCATTACTCACACCTAGAATTTTTAAGAATGG
TGAAATAAAACAAACTCTTCTTAATTATTTTCATGAATTTGTTGTAACTT
TAAATCCCACGTTTAACAAGGATTATTGCTCTTAATGAATTTCTTATTTG
GCACATGCAGTCTAAGAGTTCATTAAAATAATTATCTCAAGTGAGTAATT
GTGGTTTATAAGGAGGCTTTTAGGATGACAGAGAGCATGAAGTTGTGGGA
GTGGGGGCCTATTTATGATGAAGATGAGAAAAGAAATTATCAAAATATAA
TGGGTGAAAAACAAAAATAATAATAAAGACAAAAATCCCTTTATTTTCAA
AACTTTAGTTATGCAATTTCCATAGATGAAAATGTTATTTTATTAGTAAC
ATCTAACACAATTTCTAATAAAGACTTCCTCCACACTTTAAAATTAAGAT
CATTATATTATTATTCATTAGCAATGTGTGACCAGATTTCACTGAATTTC
CAACCACTTCAAGAAAATCATTTCTTCTTAATCCTTGAATCTTTTCTTGA
AAAGGTTTTGTTACATTTGTCCCATAATCTTGAACAACAGCGTCATCCTG
GTCTAACTAACTCTTTTTTTTCTCTCCAGAAAACTTTTTTGT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCCCAGAATGCACCAGAGACCTGGGAGGAAGAGT
CTCCCAGGCCTCAAAGGGAAGGACCTTAGATGAAATTCCAGATAGTATGG
AGAAGGAGCTTATAGAGCCCACCTCCAGCCAGAAGACAGGACATCAAGTG
AGGGATGGGGTTGCCACCCCACAGTCACATCTCTGACCCATAATTGTTCC
TGTCTGAAAGAATTACAGGGATGGAAATGGAGAGGAGCCTGAGGAAAAGA
AGGTCCAGCAACAGGTCTTTTTTGGTATTCAGCTCAAGAGGAGGTTCCAA
GGCCTGATACTATTACTGAGGCTCTGGGGAGCTCACAAAAAGGGACCTGT
CATGATTGTCCTACAAAGAACCCAACAAGAAGCTGAAAGAGTCTTATGCT
GATATTTGCCTTCTAACCCATGGATAGAATCAGCTGACCCTTGTTGAATT
AAGGTAGGTTGTATGTTTTCGAGGTGAATTTTATCTTTGTTTTTGTTTCC
TTCTTTCTTTCTCTGCTCCCCTGATCGCTCCTTATCTTGTTTTTTCATCT
TTCTTTCTTTTCCTCCTCCCCTCATCTTTTCCTCGTCTTTCTCCTGTCTT
TTTTTTTTTATTTTTTTTGTTCCTTTTCGTTATCTTGGTTCTTTTGGTAG
TGATACTTGAGCTTTTTATTTTTGTCTCGTCTTTTTCTTC

Query= MSMg01no434_g19.b1 MSMg01no434_g19.b1 CHROMAT_FILE:
MSMg01no434_g19.b1 PHD_FILE: MSMg01no434_g19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:50 2005
         (506 letters)



>mm_chr6_10441415_10442320
          Length = 906

 Score =  909 bits (470), Expect = 0.0
 Identities = 497/506 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccaatgcaaatatctcacactgagatactcttttacattgtgtcaagttcacaattaaaa 60
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 ccaatgcaaatatctcacattgagatactcttttacattgtgtcaagttcacaattaaaa 647

                                                                       
Query: 61  tcattactcacacctagaatttttaagaatggtgaaataaaacaaactcttcttaattat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tcattactcacacctagaatttttaagaatggtgaaataaaacaaactcttcttaattat 587

                                                                       
Query: 121 tttcatgaatttgttgtaactttaaatcccacgtttaacaaggattattgctcttaatga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tttcatgaatttgttgtaactttaaatcccacgtttaacaaggattattgctcttaatga 527

                                                                       
Query: 181 atttcttatttggcacatgcagtctaagagttcattaaaataattatctcaagtgagtaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 atttcttatttggcacatgcagtctaagagttcattaaaataattatctcaagtgagtaa 467

                                                                       
Query: 241 ttgtggtttataaggaggcttttaggatgacagagagcatgaagttgtgggagtgggggc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 ttgtggtttataaggaggcttttaggatgacagagagcatgaagttgtgggagtgggggc 407

                                                                       
Query: 301 ctatttatgatgaagatgagaaaagaaattatcaaaatataatgggtgaaaaacaaaaat 360
           |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 406 ctatttatgatgaagatgagaaaataaattatcaaaatataatgggtggaaaacaaaaat 347

                                                                       
Query: 361 aataataaagacaaaaatccctttattttcaaaactttagttatgcaatttccatagatg 420
           ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||
Sbjct: 346 aataataaagacaaaaatcactttattttcaaaactttaattatgcaattaccatagatg 287

                                                                       
Query: 421 aaaatgttattttattagtaacatctaacacaatttctaataaagacttcctccacactt 480
           |||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||
Sbjct: 286 aaaatgttattttattagtaacatctaacacagtatctaataaagacttcatccacactt 227

                                     
Query: 481 taaaattaagatcattatattattat 506
           ||||||||||||||||||||||||||
Sbjct: 226 taaaattaagatcattatattattat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space:   444416
Effective search space used:   444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)