Query= MSMg01no435_h16.b1 MSMg01no435_h16.b1 CHROMAT_FILE:
MSMg01no435_h16.b1 PHD_FILE: MSMg01no435_h16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:14 2005
(441 letters)
>mm_chr6_18607992_18608832
Length = 841
Score = 774 bits (400), Expect = 0.0
Identities = 421/428 (98%)
Strand = Plus / Plus
Query: 7 gaattctttatgtatcttactaagatgcacttactatttatctataatttttttccctaa 66
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctttatggattttactaagatgcacttactatttatctataatttttttccctaa 266
Query: 67 catagacttgctctgcactaccttttccttactcatacatgaatcctgtgtgacatttta 126
|||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 267 catagacttgatctgcactaccttttccttactcatacatgaatcctttgtgacatttta 326
Query: 127 tacgtccaaagtttaaggtcctttacatacccacttgtatctaagaacatagccacattt 186
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 327 tacgtccaaagtttaaggtcctttacatacccacttgtatctaagaacatagccacatct 386
Query: 187 atctttttgttgttctctgctttgtttttgaagtggggtatcactacgtagccaaggcta 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 atctttttgttgttctctgctttgtttttgaagtggggtatcactacgtagccaaggcta 446
Query: 247 gtactagagtcataatcctgctttggtgttctgagtgcttaatttaggagcctagaccac 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gtactagagtcataatcctgctttggtgttctgagtgcttaatttaggagcctagaccac 506
Query: 307 cattaccttttactatggtcattcttagccctaacattaatctcaggtaccatttattct 366
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 cattaccttttactacggtcattcttagccctaacattaatctcaggtaccatttattct 566
Query: 367 ttgtaaataattgtgggtaactctatgtgctgtttcagccagtgatagttataaatacct 426
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 567 ttgtaaataattgtgggtaactctatgtgctgtttcagccagtgatagttataaatacat 626
Query: 427 catctata 434
||||||||
Sbjct: 627 catctata 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no435_h16.g1 MSMg01no435_h16.g1 CHROMAT_FILE:
MSMg01no435_h16.g1 PHD_FILE: MSMg01no435_h16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:14 2005
(409 letters)
>mm_chr6_18774969_18775777
Length = 809
Score = 700 bits (362), Expect = 0.0
Identities = 368/370 (99%), Gaps = 1/370 (0%)
Strand = Plus / Minus
Query: 41 tagggttctggaaaccttcatgtgttatgggctaattgtactaagataagaaaacaggct 100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 tagggttctggaaaccttcatgtgttatgggctaattgtactaagataagaaaacaggct 750
Query: 101 tggaacaaattaacaatgagggaaaccatcccttctaggttagctgggacactactatct 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 tggaacaaattaacaatgagggaaaccatcccttctaggttagctgggacactactatct 690
Query: 161 ggtaactaaaagtcataaactgggagtgggcaatttattgtgggtgcaaggacaaaaaag 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ggtaactaaaagtcataaactgggagtgggcaatttattgtgggtgcaaggacaaaaaag 630
Query: 221 aaaaatattgacttgttttttttt-aatttaaaccgttttattataaaagtaatacaaat 279
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 629 aaaaatattgacttgttttttttttaatttaaaccgttttattataaaagtaatacaaat 570
Query: 280 gacaaataaaatgtggagaaggacaaaggcatccacttgctgcctgccatcctactgaaa 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gacaaataaaatgtggagaaggacaaaggcatccacttgctgcctgccatcctactgaaa 510
Query: 340 ccactttcagtatctattgtcactttcatagcctggcgtgtcattcacacccatgaccac 399
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ccactatcagtatctattgtcactttcatagcctggcgtgtcattcacacccatgaccac 450
Query: 400 gctagtgctc 409
||||||||||
Sbjct: 449 gctagtgctc 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space: 320000
Effective search space used: 320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
