Query= MSMg01no436_c22.b1 MSMg01no436_c22.b1 CHROMAT_FILE:
MSMg01no436_c22.b1 PHD_FILE: MSMg01no436_c22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:11 2005
(594 letters)
>mm_chr6_81750582_81751578
Length = 997
Score = 772 bits (399), Expect = 0.0
Identities = 436/455 (95%), Gaps = 14/455 (3%)
Strand = Plus / Minus
Query: 145 ctggtgcgttcttagttcaatgagagactctctcaaacaaacaaacaaacaaacaaacaa 204
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 997 ctggtgcgttcttagttcaatgagagactctc----acaaacaaacaaacaaacaaacaa 942
Query: 205 acaaacaaacaaaccaaccaaccaaccaaccaaccaaaaaccaaacccaagatagagtac 264
|| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 accaaccaaccaaccaaccaaccaaccaaccaaccaaaaaccaaacccaagatagagtac 882
Query: 265 atccagtgtggacttctggccttcagacacgtgcacacatgtgcacacacatgcacaagt 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 atccagtgtggacttctggccttcagacacgtgcacacatgtgcacacacatgcacaagt 822
Query: 325 acacatacaccccccccccacacacacgttaaaaaatgaaacaatagcaacaaaaacaat 384
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 acacataca---cccccacacacacacgttaaaaaatgaaacaatagcaacaaaaacaat 765
Query: 385 atccaatctctttgttccttcttaatccatttactgcttaagtttcccctcccatagcct 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 atccaatctctttgttccttcttaatccatttactgcttaagtttcccctcccatagcct 705
Query: 445 tggaaagatctatgagcgttgggtagacattaattaaaaaaaattccctacctaacttac 504
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 tggaaagatctatgaacgttgggtagacattaattaaaaaaaattccctacctaacttac 645
Query: 505 tat-----aaacaaaaacaggcacccatgtcttctgaagtcctcaacccaaaaaaaaaaa 559
||| |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 644 tataaacaaaacaaaaacaggcacccatgtcttctgaagtcctcaacc--aaaaaaaaaa 587
Query: 560 ttgtctgtattttgcaatactgctgctggtccatc 594
|||||||||||||||||||||||||||||||||||
Sbjct: 586 ttgtctgtattttgcaatactgctgctggtccatc 552
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 997
Length adjustment: 10
Effective length of query: 584
Effective length of database: 987
Effective search space: 576408
Effective search space used: 576408
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no436_c22.g1 MSMg01no436_c22.g1 CHROMAT_FILE:
MSMg01no436_c22.g1 PHD_FILE: MSMg01no436_c22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:11 2005
(423 letters)
>mm_chr6_81619129_81619951
Length = 823
Score = 700 bits (362), Expect = 0.0
Identities = 400/422 (94%), Gaps = 17/422 (4%)
Strand = Plus / Plus
Query: 1 tgtgcaactctgctccattcatcctcattggccagtgactaacaactccatggtgaaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgcaactctgctccattcatcctcattggccagtgactaacaactccatggtgaaggg 260
Query: 61 aagaccagaaccacaagagatggattttatccaaactaaatggattcctgcctcccttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagaccagaaccacaagagatggattttatccaaactaaatggattcctgcctcccttaa 320
Query: 121 aaacatgaaatttttatgtcagcttagccgccatgttcatacatgcaacaccaaaggtag 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 aaacatgaaatttttatgtcagcttagccgccatgtgcatacatgcaacaccaaaggtag 380
Query: 181 agactggagcgtgctgccagcctgagttcaagttcagtgagagatcctgcttcaaaaaat 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 agactggagcgtgctgccagcctgagttcatgttcagtgagagatcctgcttcaaaaaat 440
Query: 241 aagattaaatataagagagcaagatattggtgtcctccactactctctatccacaagctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagattaaatataagagagcaagatattggtgtcctccactactctctatccacaagctt 500
Query: 301 agacaaatatgatacccatataaaccacacaaacacacacacacacacacacacacacac 360
||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 agacaaatatgatacccatataaaccacacaaacacacacacacacacaca-a------- 552
Query: 361 acacacacgaggaggaagaggaagaggaagaggaagagagaagaagaagaagaagaagaa 420
|||||||||||||||||||||||||||||| ||||| ||||| ||||| |||
Sbjct: 553 --------gaggaggaagaggaagaggaagaggaagag-gaagaggaagaggaagaggaa 603
Query: 421 ga 422
||
Sbjct: 604 ga 605
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
