TCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGTGTATACCCCTGGAGTGGTAGAGCTGGATCACTGGATGGCTC
TATGTTGAGTTTTTTCTTGTTGTTTGTTTGAGAAATTTCCACGTGGATTC
AAAGTTTACATCTCCAACCATATAAATAAAGGTTTTCCTTTCCCCACATT
CTCACCAAAACTTATTTTCTTCATGAGAGACCTTCTGACTGAATGAGATA
GAACCACAAAGCAGTTTGATTTTGTATTTCTCCAATAGATAAGGAGGTTG
AGCATTTTAAATAAAATATTTATTGCCCACTTGTATTTAAATTCCATTTG
TATTTTTCTGTTATTACTAAAATCTTTGCCCTCACCAGCAGCCATCATAA
AAGAAGTATCTTTGACCAAATCTTAGAGCATTACTATTTTATAGACATAA
GCATAGTTACCTAGAAGGCCATTTGACGATGACATGATATCCATTTGACA
AAACACAGAAGTATCTTCCCCACTAGAGCCTCTTTATCCATGGACTTTTA
TACTTGATTTACAATACCTAATATAAATCACTCTTGCATGGACTGTGCAT
ATTANACCCAACCAAAAAGCAGTTGGTTACATCCATAACAGATTTATCAT
TATATACTAGAGATTTCAGCTCATCTGGCAGAGCAGTACTTTTGCACTAT
GGTACAGAGCTAAGTATGTGTGATCATAATAATTCTCTTCTAGCAGCCTG
GAGCCTN

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCAGTCATAACTTCCTTTGGTGATGAACA
GCAGTATGGAAGTATAAGCTGAATTAACCCTTTCCTCCCCAACTTGCTTC
TTGGTCATGATGTTTGTGCAGGAATAGGAACCCTGACTAAGACATTTGAT
TATAATTAAGCAATTTTGCAAAGTATCTAGTTATTTTAAAATAAGAAAGC
ATTTAAAACAGTAGTTTTACGTTTAGTCTCTTTATAATTTCATCCCATGT
TATTTGTCCATATTCACCCTATTTTCTGAACTCTTCCCAGAGACATGCTC
CCCCAATTCTTTAATCATCCAACTTTGTGTACTGTTCTCGTTGTCATTGT
TTGCTTGCTTTCTCAAACACATCAGTTCCAATGTGGGATGCCAATTTAAT
GCATGGTTTTCCACTGGATCACTGTTAAAGTAGCAGGAGCCACATTCTTA
AAACTGATGATCTGTCATTTTCAAGTTAGCTTCTTGACTGGGAATGGGAC
TTTGTACTCAGATCCCCTTTTTGTGTTGCTGTTTTGTCTGGCTTGAGCTT
TCCCAAATCTTATGCCTGCTGTTGCAGTCACCATAATCGTATAACTGTTC
TAATGTTTCCTGAGATCACTGGTAACTTGTAGCCCTCCATCCCCTCTGGT
CCTATAACCTCTCTGCTTGGCTACTGTTGTGAAAAGGAAGATGCTGTGTT
CTTTTC

Query= MSMg01no437_n13.g1 MSMg01no437_n13.g1 CHROMAT_FILE:
MSMg01no437_n13.g1 PHD_FILE: MSMg01no437_n13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:23 2005
         (549 letters)



>mm_chr6_103553724_103554672
          Length = 949

 Score = 1038 bits (537), Expect = 0.0
 Identities = 546/549 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagtcataacttcctttggtgatgaacagcagtatggaagtataagctgaattaaccctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtcataacttcctttggtgatgaacagcagtatggaagtataagctgaattaaccctt 260

                                                                       
Query: 61  tcctccccaacttgcttcttggtcatgatgtttgtgcaggaataggaaccctgactaaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctccccaacttgcttcttggtcatgatgtttgtgcaggaataggaaccctgactaaga 320

                                                                       
Query: 121 catttgattataattaagcaattttgcaaagtatctagttattttaaaataagaaagcat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catttgattataattaagcaattttgcaaagtatctagttattttaaaataagaaagcat 380

                                                                       
Query: 181 ttaaaacagtagttttacgtttagtctctttataatttcatcccatgttatttgtccata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaaaacagtagttttacgtttagtctctttataatttcatcccatgttatttgtccata 440

                                                                       
Query: 241 ttcaccctattttctgaactcttcccagagacatgctcccccaattctttaatcatccaa 300
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 ttcaccctattttctgaactcttcccagagacatgttcccccaattctttaatcatccaa 500

                                                                       
Query: 301 ctttgtgtactgttctcgttgtcattgtttgcttgctttctcaaacacatcagttccaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctttgtgtactgttctcgttgtcattgtttgcttgctttctcaaacacatcagttccaat 560

                                                                       
Query: 361 gtgggatgccaatttaatgcatggttttccactggatcactgttaaagtagcaggagcca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 561 gtgggatgccaatttaatgcatggttttccactggatcactgttaaagtagcaggggcca 620

                                                                       
Query: 421 cattcttaaaactgatgatctgtcattttcaagttagcttcttgactgggaatgggactt 480
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 621 cattcttaaaactgatgatctgtcattttcaagttagcttcttgagtgggaatgggactt 680

                                                                       
Query: 481 tgtactcagatcccctttttgtgttgctgttttgtctggcttgagctttcccaaatctta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgtactcagatcccctttttgtgttgctgttttgtctggcttgagctttcccaaatctta 740

                    
Query: 541 tgcctgctg 549
           |||||||||
Sbjct: 741 tgcctgctg 749


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space:   506121
Effective search space used:   506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)