Query= MSMg01no439_j18.b1 MSMg01no439_j18.b1 CHROMAT_FILE:
MSMg01no439_j18.b1 PHD_FILE: MSMg01no439_j18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:47 2005
(344 letters)
>mm_chr6_36182022_36182765
Length = 744
Score = 460 bits (238), Expect = e-134
Identities = 298/344 (86%), Gaps = 40/344 (11%)
Strand = Plus / Plus
Query: 1 agtagttggcagcctgattgtttggggaaaacgtttgtaaatgttcgggatagatgagct 60
|||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 241 agtagttggcagcctgattgtttggggaaaacatttgtaaatgttcggaatagatgagct 300
Query: 61 tttgtatctcagttcctccctctctccctctctccctctctccctctctccctctcttcc 120
|||||||||||||||||| |
Sbjct: 301 tttgtatctcagttcctc----------------------------------------ca 320
Query: 121 tctctccctctatgccccattcatggcctttcaaatctaagaatgtgatctggggtcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctctccctctatgccccattcatggcctttcaaatctaagaatgtgatctggggtcacc 380
Query: 181 tgcagtgccttgacctttgatcactgcccttcctaaaactggttactttgtttctagctt 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcagtgccctgacctttgatcactgcccttcctaaaactggttactttgtttctagctt 440
Query: 241 ccacaatcctcctccagttgttttacatagtaatgttctcttgtggttttcctccagttt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcacaatcctcctccagttgttttacatagtaatgttctcttgtggttttcctccagttt 500
Query: 301 ttaatttttaatatattgcctgaaaaatttgcccctcttgttgc 344
| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taaatttttaatatattgcctgaaaaatttgcccctcttgttgc 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_j18.g1 MSMg01no439_j18.g1 CHROMAT_FILE:
MSMg01no439_j18.g1 PHD_FILE: MSMg01no439_j18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:47 2005
(244 letters)
>mm_chr6_36313015_36313657
Length = 643
Score = 441 bits (228), Expect = e-128
Identities = 240/244 (98%), Gaps = 1/244 (0%)
Strand = Plus / Minus
Query: 1 atagatttaagaaagaacctgggacatgggaagagctcagtgggtagaaatgatatatac 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 atagatttaagaaaggacctgggacatgggaagagctcagtgggtagaaatgatatatac 384
Query: 61 ctaggtatgtagtcaatatgtgagtctaaccaacagatttcttgaggtacaactctcaat 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctaggtatgtagtcaatatgtgagtctaaccaacagatttcttgaggtacaactctcaa- 325
Query: 121 tttttttttaaacttcatagtctatgctgacacatagcaagcgttaagcacctataatct 180
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 324 tttttttttaaacttcatagtctatgctgacacatagcaagagttaaacacctataatct 265
Query: 181 agacagagtctcgtattataaagaaaaattacaacagaaggcattgaggtgtcttgctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agacagagtctcgtattataaagaaaaattacaacagaaggcattgaggtgtcttgctat 205
Query: 241 attt 244
||||
Sbjct: 204 attt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 643
Length adjustment: 9
Effective length of query: 235
Effective length of database: 634
Effective search space: 148990
Effective search space used: 148990
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
