Query= MSMg01no439_m12.b1 MSMg01no439_m12.b1 CHROMAT_FILE:
MSMg01no439_m12.b1 PHD_FILE: MSMg01no439_m12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:00 2005
(246 letters)
>mm_chr6_79000920_79001565
Length = 646
Score = 466 bits (241), Expect = e-136
Identities = 244/245 (99%)
Strand = Plus / Minus
Query: 1 tgctgacatgggttgtgactcgtaattaggtgagtcacccataattggaaatattcaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgctgacatgggttgtgactcgtaattaggtgagtcacccataattggaaatattcaatt 386
Query: 61 caatgcaaatgagactttattctcatattttatctatttctaattagggagggaaacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caatgcaaatgagactttattctcatattttatctatttctaattagggagggaaacaca 326
Query: 121 gtagtagtctaaactggtatctccaccaacaaaaaaactcatttcaatgtaggatggatg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 325 gtagtagtctaaactggtatctccaccaacaaaaaaactcatttcaatgtaggatggaag 266
Query: 181 tattgaaggtgttttatgctccttttgtgttggggaaacactgggtaggagtgtattcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tattgaaggtgttttatgctccttttgtgttggggaaacactgggtaggagtgtattcac 206
Query: 241 aattt 245
|||||
Sbjct: 205 aattt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no439_m12.g1 MSMg01no439_m12.g1 CHROMAT_FILE:
MSMg01no439_m12.g1 PHD_FILE: MSMg01no439_m12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:00 2005
(243 letters)
>mm_chr6_78825393_78826034
Length = 642
Score = 391 bits (202), Expect = e-113
Identities = 211/216 (97%), Gaps = 4/216 (1%)
Strand = Plus / Plus
Query: 1 cctcgaatcaaatccctggaatcctcagaaagttcaatatttataataattataatattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctcgaatcaaatccctggaatcctcagaaagttcaatatttataataattataatattg 260
Query: 61 ttaaattttcagtcatcaggctccacctgttcttgttgtacagatagcacaaccatttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaattttcagtcatcaggctccacctgttcttgttgtacagatagcacaaccatttct 320
Query: 121 acaattgccagggaagcacagagccccaacttacaccaaactttctttttctttcttttt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 acaattgccagggaagcacagagccccaacttacaccaaactttctttttcttt----tt 376
Query: 181 tttcctcatatttatttatttatttatttatttatt 216
||||||||| ||||||||||||||||||||||||||
Sbjct: 377 tttcctcatctttatttatttatttatttatttatt 412
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 642
Length adjustment: 9
Effective length of query: 234
Effective length of database: 633
Effective search space: 148122
Effective search space used: 148122
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
