TTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCACAGGAAAATTCCGTAGAGGGTAGATGCAAGAGGATCT
CTGGGGCATGATGGCTGTCAGCCTAGCTCCAAGTTCAGTGAAACATTGTC
TGAAAGGAAAGAGGTGGAGAGTGGTAGAAGCAGAACACTCAATATCTGTC
TCTAGCACACGTGTGCGAGCGCACGCGCACACACACACAGAAGCACACAC
AGGCACACACTCACAGGCACAGACACACACAGGCACACACACAGACACAC
ACACACACACAGACACACACTCACAGGCACACACACTGATACACACCCAC
TGGCACACACACATATACACAGACACACATATAGGTACACACAGGCATAC
ACTCAAGGCACACACTCACAGGCATATGTGCAGACACACAGTGGCACACA
CTGACACACACAGGCACAAACAGACACACAGAAACACACAGGCACACACT
CACAGTCACACACACATGCACACACACAGGCACACACACAAGCATACTAC
ACATATACACAGACACACTCATAGGCACACACAGGCATACACACACAGGC
ATACACACACAGGCACATACTCACAGGCATACCACACATATACACAGTGT
GACACCCTGGAACTCCCCCCCCCACCCCAACTCCTTGGGGCCCACAGGGG
CAAAACCTCCCAAATACCCCTGTGCCGGGCCCCATTAGGTGGGGGTCCTA
TAAGGCGCCCCCTATTGTCTCT

NTTTTTCGATGCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTTTTAAATAAATAGTTTGT
TAATAATAGCTCCAACTATTGCATATAAGTGAAGTGAATGACGCACTGCC
CTATTAGGCACAGCTTGTATTCCCAGTTTTCTATTATTTTTCTCAGTGGA
CAGGATTCAGGGGAGCCGATGCCCATGATTTAGGGAGGGGCCTATTTTTG
GTGGAAGCATGGTCATTTGCCTGTCTTTAGTGGAAGGGCTAAGAGGCAAG
GGTGTGTTAAGAAAATCCATAGAGGCTGGGCAGTGGTGGTGCATGCCTTT
AATCTCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCC
AGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAA
CCCTGTCTCGGAAAAAAAAAAAAAAGAAACATAGTTTAGGACCTAAAGTA
AAATGTTAGGGCTAAGATGACATGCAAAACTGACTCCTTCTGAACTGCAT
ACAAAACATGTAACATATAATTTTCCCCAGAACAGTCCTCAGGCAACTAT
GTACATACATCTACATATGTGGGAAAATACTATCCACTTTTCCTAAGAAA
AGGGGCGACCAAAAGGGACCCGGGTGAAAAAAGTGGACCTCTGGGGAATT
CCCCGGTTGTAGCCCAGGGACCTTGCCGGGGTTTCCTCAACTGGGAAAGA
CCTCCCCCCCCCTCACCTGAATG

Query= MSMg01no440_d24.g1 MSMg01no440_d24.g1 CHROMAT_FILE:
MSMg01no440_d24.g1 PHD_FILE: MSMg01no440_d24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:38 2005
         (436 letters)



>mm_chr6_92732634_92733469
          Length = 836

 Score =  783 bits (405), Expect = 0.0
 Identities = 429/437 (98%), Gaps = 1/437 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcttttaaataaatagtttgttaataatagctccaactattgcatataagtgaagtgaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttttaaataaatagtttgttaataatagctccaactattgcatataagtgaagtgaat 260

                                                                       
Query: 61  gacgcactgccctattaggcacagcttgtattcccagttttctattatttttctcagtgg 120
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 gacgcactgccctattaggcacagcttgtattcccaattttctattatttttctcagtgg 320

                                                                       
Query: 121 acaggattcaggggagccgatgcccatgatttagggaggggcctatttttggtggaagca 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 acaggattcaggggagccgatgcccatgatttagggaggggcctatttttggcggaagca 380

                                                                       
Query: 181 tggtcatttgcctgtctttagtggaagggctaagaggcaagggtgtgttaagaaaatcca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggtcatttgcctgtctttagtggaagggctaagaggcaagggtgtgttaagaaaatcca 440

                                                                       
Query: 241 tagaggctgggcagtggtggtgcatgcctttaatctcagcacttgggaggcagaggcagg 300
           ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagaggctgggcagtggtggcacatgcctttaatctcagcacttgggaggcagaggcagg 500

                                                                       
Query: 301 tggatttctgagtttgaggccagcctggtctacaaagtgagttccaggacagccagggct 360
           ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggatttctgagttcaaggccagcctggtctacaaagtgagttccaggacagccagggct 560

                                                                       
Query: 361 acacagagaaaccctgtctcggaaaaaaaaaaaaaa-gaaacatagtttaggacctaaag 419
           | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 agacagagaaaccctgtctcggaaaaaaaaaaaaaaagaaacatagtttaggacctaaag 620

                            
Query: 420 taaaatgttagggctaa 436
           |||||||||||||||||
Sbjct: 621 taaaatgttagggctaa 637


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space:   353129
Effective search space used:   353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)