Query= MSMg01no441_l05.b1 MSMg01no441_l05.b1 CHROMAT_FILE:
MSMg01no441_l05.b1 PHD_FILE: MSMg01no441_l05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:35 2005
(468 letters)
>mm_chr6_108555072_108555939
Length = 868
Score = 835 bits (432), Expect = 0.0
Identities = 463/480 (96%), Gaps = 12/480 (2%)
Strand = Plus / Plus
Query: 1 ccagatacaatgggactgtgtatcaagctttttcttccctcccttttttgattgtttgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ccagatacaatgggactgtgtatcaagctttttcttccctcccttttttgattgtttgtt 248
Query: 61 tgactctcatgtagcccaggccaccaacttgagatctatctatctatctatctatctatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tgactctcatgtagcccaggccaccaacttgagatctatctatctatctatctatctatc 308
Query: 121 tatctatctatctatct----atctatccatccatccatcc--------cagggtgacct 168
||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 309 tatctatctatctatctctctatctatccatccatccatccatccatcccagggtgacct 368
Query: 169 tgaatttctgcttctcctgtctttacttccagacaacaccaccacacttgactttatgct 228
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tgaatttctgctcctcctgtctttacttccagacaacaccaccacacttgactttatgct 428
Query: 229 gatgatccctcccagggcttcaaatactctaggcaggcactctacccaatgaggcacgtc 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gatgatccctcccagggcttcaaatactctaggcaggcactctacccaatgaggcacgtc 488
Query: 289 tccagccctgtttgctgctttcattagagagtttagtgtttccttcagctgtgtacagtg 348
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 489 tccagccctgtttgctgctttcattagagagtttagtgtctccttcagctgtgtacagtg 548
Query: 349 atggcaaagtctgactgtggagcccaccttctggggtgtagagcgggtcacagaacagga 408
||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 549 atggcaaagcctgactgtggagcccaccttctgggttgtagagcgggtcacagaacagga 608
Query: 409 cagaacaggattcttccctctgcactcttggcactgagtgacacacaaaattggatggat 468
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 609 cagaacaggattcttccctctgcactcttggcactgagtgacacacaaaactggatggat 668
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no441_l05.g1 MSMg01no441_l05.g1 CHROMAT_FILE:
MSMg01no441_l05.g1 PHD_FILE: MSMg01no441_l05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:35 2005
(203 letters)
>mm_chr6_108659265_108659867
Length = 603
Score = 385 bits (199), Expect = e-111
Identities = 202/203 (99%)
Strand = Plus / Minus
Query: 1 cacttcctgcggtccgggccccagaagtgtgggagtggtgggggttggtttcttaggatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 cacttcctgcggtccgggccccagaagtgtgggagtggtgggggttggtttcttaggatg 344
Query: 61 acaccactcagtatgctgcatctcctcattcgcacacgctgttgtcatggagacgaacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 acaccactcagtatgctgcatctcctcattcgcacacgctgttgtcatggagacgaacag 284
Query: 121 catcctgacagccccggagaggccaattcgcccagaagaaatgaccggggcatggccgac 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 283 catcctgacagccccggagaggccaattcgcccacaagaaatgaccggggcatggccgac 224
Query: 181 tcaggaaaacactgactgtgtgg 203
|||||||||||||||||||||||
Sbjct: 223 tcaggaaaacactgactgtgtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 603
Length adjustment: 8
Effective length of query: 195
Effective length of database: 595
Effective search space: 116025
Effective search space used: 116025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
