Query= MSMg01no442_b15.b1 MSMg01no442_b15.b1 CHROMAT_FILE:
MSMg01no442_b15.b1 PHD_FILE: MSMg01no442_b15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:07 2005
(276 letters)
>mm_chr6_116944926_116945601
Length = 676
Score = 302 bits (156), Expect = 2e-86
Identities = 162/164 (98%)
Strand = Plus / Minus
Query: 5 gaattccatttatttcacttacagggctacttgtaccttaccaatggctacactgctgaa 64
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gaattccatttagctcacttacagggctacttgtaccttaccaatggctacactgctgaa 307
Query: 65 gaaagtgtctcccgatgctgttaactattatctgtatataagtctacatacaaatgttta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gaaagtgtctcccgatgctgttaactattatctgtatataagtctacatacaaatgttta 247
Query: 125 atgccccaggagtcctttctgattccatgacaggatgttgacag 168
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 atgccccaggagtcctttctgattccatgacaggatgttgacag 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 676
Length adjustment: 9
Effective length of query: 267
Effective length of database: 667
Effective search space: 178089
Effective search space used: 178089
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no442_b15.g1 MSMg01no442_b15.g1 CHROMAT_FILE:
MSMg01no442_b15.g1 PHD_FILE: MSMg01no442_b15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:08 2005
(384 letters)
>mm_chr6_116884897_116885681
Length = 785
Score = 714 bits (369), Expect = 0.0
Identities = 381/385 (98%), Gaps = 1/385 (0%)
Strand = Plus / Plus
Query: 1 acctgtccagtgtgctcctggcatccaggctgagagggagattcacatacatgggcaatt 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctgtccagtgtgctcctggcacccaggctgagagggagattcacatacatgggcaatt 260
Query: 61 catgtctagggtcattgtagccatggccaaagttgctcaaaccaaaatctatttcgaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catgtctagggtcattgtagccatggccaaagttgctcaaaccaaaatctatttcgaaaa 320
Query: 121 aggacagcaacaaagttaaaattaaacagctcttctacctcaagaacagcacaaacagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggacagcaacaaagttaaaattaaacagctcttctacctcaagaacagcacaaacagct 380
Query: 181 caatagacttccagtaaactgcctgtgcaggacacccctccaccccacccc-atcccagg 239
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 381 caatagacttccagtaaactgcctgtgctggacacccctccaccccacccccatcccagg 440
Query: 240 actttcctgtgagaacattccaacccaggacctgactttggcagcaactgagtccgaaac 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 actttcctgtgagaacattccaacccaggacctgactttggcagcaactgagtccgaagc 500
Query: 300 cccttctcagggggacgtggtgactgtgatttctggcccaagagttgagcctgaaataga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cccttctcagggggacgtggtgactgtgatttctggcccaagagttgagcctgaaataga 560
Query: 360 tgaagtgtttgaggagatccgcagg 384
|||||||||||||||||||||||||
Sbjct: 561 tgaagtgtttgaggagatccgcagg 585
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 785
Length adjustment: 9
Effective length of query: 375
Effective length of database: 776
Effective search space: 291000
Effective search space used: 291000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
