Query= MSMg01no444_o04.b1 MSMg01no444_o04.b1 CHROMAT_FILE:
MSMg01no444_o04.b1 PHD_FILE: MSMg01no444_o04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:55 2005
(273 letters)
>mm_chr6_6535876_6536549
Length = 674
Score = 455 bits (235), Expect = e-132
Identities = 262/271 (96%), Gaps = 1/271 (0%)
Strand = Plus / Plus
Query: 4 gaattcttgttgtctg-accattagatttgttgagtgggtgcccaaaggaatctctgacg 62
|||||||||||||| | | |||||||||||||||||||||||||||||||||||||| |
Sbjct: 204 gaattcttgttgtcaggagtattagatttgttgagtgggtgcccaaaggaatctctgaag 263
Query: 63 atatttgaaacctcgctaaacaaagccatggacattgtattgtgaagcaaaacacttaat 122
|||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 264 atatttgaaacctcactaaacaaagccatggacattgtattgtgaagcacaagacttaat 323
Query: 123 ggcaagaggggaagcccggatcaacgacaaggacttttccagctctaatttctactattc 182
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 324 ggcaagaggggaagcccggatcaacgacaaagacttttccagctctaatttctactattc 383
Query: 183 catagttctgtgaatagttgctaaattgcttgatcaacccagacaaatagaactcaacac 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 catagttctgtgaatagttgctaaattgcttgatcaacccagacaaatagaactcaacac 443
Query: 243 aagaacaaaacctcagacaaaacaataaagc 273
|||||||||||||||||||||||||||||||
Sbjct: 444 aagaacaaaacctcagacaaaacaataaagc 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 674
Length adjustment: 9
Effective length of query: 264
Effective length of database: 665
Effective search space: 175560
Effective search space used: 175560
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no444_o04.g1 MSMg01no444_o04.g1 CHROMAT_FILE:
MSMg01no444_o04.g1 PHD_FILE: MSMg01no444_o04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:55 2005
(213 letters)
>mm_chr6_6727071_6727683
Length = 613
Score = 397 bits (205), Expect = e-115
Identities = 211/213 (99%)
Strand = Plus / Minus
Query: 1 ccaagtcagatccaggacagcgctgagtctatacttccaggcaattcccagggaaagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ccaagtcagatccaggacagcgctgagtctatacttccaggcaattcccagggaaagaag 354
Query: 61 caacactgaaagactgcaaaaaaagtactcttcaagtagggtacacacatgacaggaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 caacactgaaagactgcaaaaaaagtactcttcaagtagggtacacacatgacaggaaca 294
Query: 121 actggagctaagatttccacagcagaacctggcactccaagtttcttcttgactgcagtc 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 293 actggagctaagatttccacagcagaacctggcattccaagtttcttcttgactgcagtc 234
Query: 181 atcatggtgaaagcatttgaccaggttgccacc 213
|||||||||||||||||||||||||| ||||||
Sbjct: 233 atcatggtgaaagcatttgaccaggtcgccacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 213
Length of database: 613
Length adjustment: 9
Effective length of query: 204
Effective length of database: 604
Effective search space: 123216
Effective search space used: 123216
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
