Query= MSMg01no445_c07.b1 MSMg01no445_c07.b1 CHROMAT_FILE:
MSMg01no445_c07.b1 PHD_FILE: MSMg01no445_c07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:15 2005
(651 letters)
>mm_chr6_75712242_75713292
Length = 1051
Score = 1077 bits (557), Expect = 0.0
Identities = 629/653 (96%), Gaps = 4/653 (0%)
Strand = Plus / Plus
Query: 1 cttcagttaagagaactaattcgaatagtacctactgaaattttaaaggaaatatgactc 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttcagttaagagaactaattcaaatagtacctactgaaattttaaaggaaatatgactc 260
Query: 61 tagtgatataaactgttttatactagttctataattccttttcaattattctaaattttg 120
|||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 261 tagtgatataaactgttttatactagttctttaattccttttcaataattctaaattttc 320
Query: 121 tattgttgttctca-taatattctatatattagaaagaggagacttctcatactgtacta 179
|||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 tattgttgttctcaata-tattctatatattagaaagaggagacttctcatactctacta 379
Query: 180 atgaacagggctaaaaacctcccttctggaaagattcctccattactggtgcaaccacat 239
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 380 atgaacagggctaaaaacatcccttctggaaagattcctccattactggtgcaaccactt 439
Query: 240 tagaaatttttttggcaatttctcagaaaactgaaaataattctacctcaataccaagct 299
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tagaaatcaatttggcaatttctcagaaaactgaaaataattctacctcaataccaagct 499
Query: 300 aacactcctgtgtctatacccaaattatcactcactataccacagggacacttactcaac 359
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aacactcccgtgtctatacccaaattatcactcactataccacagggacacttactcaac 559
Query: 360 tattctcatagaatctttattctcaatatctagaaactggaaaaaacctagatatccctc 419
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 560 tattctcatagaatctttattcttaatatttagaaactggaaaaaacctagatatccctc 619
Query: 420 aactgaagaattaataaagaaaatgtggtatcatctaccaaatgaaatattgttcagttt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aactgaagaattaataaagaaaatgtggtatcatctaccaaatgaaatattgttcagttt 679
Query: 480 ttaaaaacaagataccatgtattcttcagacaaatgcatagaacttgagaatatcact-a 538
||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| | |
Sbjct: 680 ttaaaaacaagataccatgtattctgcagacaaatgcatagaacttgagaacatca-tca 738
Query: 539 tagttaaaccagaccctaaaggacatgtatggtatgccctcacttataagtggatagtaa 598
||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 739 tagttaaaccagacccttaaggacatgcatggtatgccctcacttataagtagatagcaa 798
Query: 599 ccataaaatacaggatacctatactacactctacagacccaaagaagttaaac 651
|||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ccataaaatacatgatacctatactacactctacagacccaaagaagttaaac 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no445_c07.g1 MSMg01no445_c07.g1 CHROMAT_FILE:
MSMg01no445_c07.g1 PHD_FILE: MSMg01no445_c07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:15 2005
(497 letters)
>mm_chr6_75859926_75860821
Length = 896
Score = 922 bits (477), Expect = 0.0
Identities = 492/497 (98%), Gaps = 1/497 (0%)
Strand = Plus / Minus
Query: 1 tgttctcttgccctctttctattgatcaggtaaatccatataattctttgtctaaaaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 tgttctcttgccctctttctattgatcaggtaaatccatataattctttgtctaaaaaca 802
Query: 61 cacaaacaaacaactacaacaaaaaccagtcaactaaagttttcgtcctccctacaaatg 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 801 cacaaacaaacaactacaacaaaaaccagtcaactaaagttttcatcctccctacaaatg 742
Query: 121 attgtgcatattttattatcttataataaaataagaaaataataagagacataactggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 attgtgcatattttattatcttataataaaataagaaaataataagagacataactggta 682
Query: 181 atagttaccaattatgtcagataaaggtcagtcttttgtagtgtcaaaccatcagcaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atagttaccaattatgtcagataaaggtcagtcttttgtagtgtcaaaccatcagcaatt 622
Query: 241 gcctttttttttttttttttttggattggagtgtggatcatacagcaagacatgatttgg 300
||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 621 gcc-ttttttttttttttttttgtattgtagtgtggatcatacagcaagacatgatttgg 563
Query: 301 ctgacacaatgttggtgaatagttgcagcaaaattgaaaaggggaggcaaatatgttcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ctgacacaatgttggtgaatagttgcagcaaaattgaaaaggggaggcaaatatgttcca 503
Query: 361 cagatgtaaaaggaatcaaatttatcaacacaaacagtccacaaagttagaatatctttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 cagatgtaaaaggaatcaaatttatcaacacaaacagtccacaaagttagaatatctttc 443
Query: 421 ttattagtgtttcctcacacagtgtacaactaaatatagtttcattttgagaattcaatt 480
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 442 ttattagtgtttcctcacacagtgtacaactaaatacagtttcattttgagaattcaatt 383
Query: 481 gtatcattccttctgac 497
|||||||||||||||||
Sbjct: 382 gtatcattccttctgac 366
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 896
Length adjustment: 10
Effective length of query: 487
Effective length of database: 886
Effective search space: 431482
Effective search space used: 431482
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
