Query= MSMg01no445_p14.b1 MSMg01no445_p14.b1 CHROMAT_FILE:
MSMg01no445_p14.b1 PHD_FILE: MSMg01no445_p14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:22 2005
(248 letters)
>mm_chr6_143087882_143088528
Length = 647
Score = 464 bits (240), Expect = e-135
Identities = 246/248 (99%), Gaps = 1/248 (0%)
Strand = Plus / Minus
Query: 1 tcttcctactactaaaagtagtggggctactgtgatcttgaaccccacggtgacctccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tcttcctactactaaaagtagtggggctactgtgatcttgaaccccacggtgacctccat 388
Query: 61 cctcccctacttctcactgactggcatgttgacaaggactgtgctgagtcaacagaagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cctcccctacttctcactgactggcatgttgacaaggactgtgctgagtcaacagaagtg 328
Query: 121 gaaatggtggggattagaagaggaatggggaaccaagaactcagagtagagtactgctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gaaatggtggggattagaagaggaatggggaaccaagaactcagagtagagtactgctta 268
Query: 181 ttcctcttgcagcgaggccagtacctgcagtgagaccagtaccttcagtgagggccattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 -gcctcttgcagcgaggccagtacctgcagtgagaccagtaccttcagtgagggccattg 209
Query: 241 tgtgaagt 248
||||||||
Sbjct: 208 tgtgaagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 647
Length adjustment: 9
Effective length of query: 239
Effective length of database: 638
Effective search space: 152482
Effective search space used: 152482
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no445_p14.g1 MSMg01no445_p14.g1 CHROMAT_FILE:
MSMg01no445_p14.g1 PHD_FILE: MSMg01no445_p14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:22 2005
(440 letters)
>mm_chr6_142898836_142899675
Length = 840
Score = 843 bits (436), Expect = 0.0
Identities = 439/440 (99%)
Strand = Plus / Plus
Query: 1 tttactacgcagacatcaggcagatgcagatggaggagggaggaccccttcctggcctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttactacgcagacatcaggcagatgcagatggaggagggaggaccccttcctggcctgg 260
Query: 61 tgaaggctcaaggctgtggttttagagaaagtgaaaggggtagatgggctgtaactccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaaggctcaaggctgtggttttagagaaagtgaaaggggtagatgggctgtaactccca 320
Query: 121 ttccgggactgcagctttataaccttaacctaggattcatcgtctcagcaaaatgtgtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttccgggactgcagctttataaccttaacctaggattcatcgtctcagcaaaatgtgtgg 380
Query: 181 tagctcgtgtggtgactcttgcctggaatcccggtactcggggaggctggagctgaaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagctcgtgtggtgactcttgcctggaatcccggtactcggggaggctggagctgaaagg 440
Query: 241 attgttgcgaagttctgagccaacctgggctacatagtgagcagtagagcagcttaggct 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attgctgcgaagttctgagccaacctgggctacatagtgagcagtagagcagcttaggct 500
Query: 301 ttaaagtgagaccctatctcaaaagaaaagatacaaataacaagactgaaatcctcagtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttaaagtgagaccctatctcaaaagaaaagatacaaataacaagactgaaatcctcagtg 560
Query: 361 tgaagactaaacacctcctacaaaaaggaaggtaccgagccctggagaaaggccattcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgaagactaaacacctcctacaaaaaggaaggtaccgagccctggagaaaggccattcac 620
Query: 421 ccacaggataacagctaagt 440
||||||||||||||||||||
Sbjct: 621 ccacaggataacagctaagt 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
