Query= MSMg01no445_p20.b1 MSMg01no445_p20.b1 CHROMAT_FILE:
MSMg01no445_p20.b1 PHD_FILE: MSMg01no445_p20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:23 2005
(248 letters)
>mm_chr6_46504684_46505333
Length = 650
Score = 437 bits (226), Expect = e-127
Identities = 244/250 (97%), Gaps = 2/250 (0%)
Strand = Plus / Plus
Query: 1 ttaatgatatgatccatgataatatcccataaatactagctcctttgagatctgatcttt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 ttaatgatatgatccatgataatatcccataaatactagctcctttgagatccgatcttt 260
Query: 61 ggctaaagtggtttaaatacttttaaagtaaaatagaaatatctaaataaaatgtgaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggctaaagtggtttaaatacttttaaagtaaaatagaaatatctaaataaaatgtgaagt 320
Query: 121 tatacagcaagtattttttt-acatttactttttgtattaattgcttattatattcattt 179
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatacagcaagtattttttttacatttactttttgtattaattgcttattatattcattt 380
Query: 180 acattttagatggagtctcccttcctggtctacccttcccactcacc-cccaccccccac 238
||||||||||| |||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct: 381 acattttagatagagtctcccttcctggtctacccttcccacccaactcccaccccccac 440
Query: 239 ccagtccatt 248
||||||||||
Sbjct: 441 ccagtccatt 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 650
Length adjustment: 9
Effective length of query: 239
Effective length of database: 641
Effective search space: 153199
Effective search space used: 153199
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no445_p20.g1 MSMg01no445_p20.g1 CHROMAT_FILE:
MSMg01no445_p20.g1 PHD_FILE: MSMg01no445_p20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:23 2005
(429 letters)
>mm_chr6_46707570_46708398
Length = 829
Score = 629 bits (325), Expect = 0.0
Identities = 328/329 (99%)
Strand = Plus / Minus
Query: 1 cacagaaggctacgagaagtgcaagaaaaatgaatgcagttcaagagaatggtaggaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 cacagaaggctacgagaagtgcaagaaaaatgaatgcagttcaagagaatggtaggaaga 270
Query: 61 aaagcctggagacagaaagaatgagaggggagactgagaagatgctaaacatagcatcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aaagcctggagacagaaagaatgagaggggagactgagaagatgctaaacatagcatcta 210
Query: 121 tttctttcattttatagtgctgagagcactctgtgtgaaatctcccttcttaaaaaattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tttctttcattttatagtgctgagagcactctgtgtgaaatctcccttcttaaaaaattg 150
Query: 181 tctaagtattcgatacagcatgttaatcacagctacggtgctgtccacaaatgctctaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tctaagtattcgatacagcatgttaatcacagctacggtgctgtccacaaatgctctaga 90
Query: 241 acccctttaccttgtttaactgaaacctttattgattagcaatggctctgcttcctctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 acccctttaccttgtttaactgaaacctttattgattagcaatggctctgcttcctctct 30
Query: 301 tcttagcttcactgacatccattctcttt 329
|||||||||||||||||||||||| ||||
Sbjct: 29 tcttagcttcactgacatccattcccttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
