Query= MSMg01no446_a07.b1 MSMg01no446_a07.b1 CHROMAT_FILE:
MSMg01no446_a07.b1 PHD_FILE: MSMg01no446_a07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:25 2005
(249 letters)
>mm_chr6_66926653_66927301
Length = 649
Score = 474 bits (245), Expect = e-138
Identities = 248/249 (99%)
Strand = Plus / Minus
Query: 1 tttttctgatcactaactagacagactacatctctacctttctggtaacactggcactag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tttttctgatcactaactagacagactacatctctacctttctggtaacactggcactag 390
Query: 61 tcaccataccttgcaaccatctagtatcagatattgctgtttttctttcaatctaaatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tcaccataccttgcaaccatctagtatcagatattgctgtttttctttcaatctaaatta 330
Query: 121 acttcctttttaatttggacaaaacaaaatgtaaatatttttgttaacagacaacagaaa 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 actccctttttaatttggacaaaacaaaatgtaaatatttttgttaacagacaacagaaa 270
Query: 181 actctcctaatccctggcatgaggttcgtacagtacagacagattctctagctgctggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 actctcctaatccctggcatgaggttcgtacagtacagacagattctctagctgctggca 210
Query: 241 gcacagcta 249
|||||||||
Sbjct: 209 gcacagcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no446_a07.g1 MSMg01no446_a07.g1 CHROMAT_FILE:
MSMg01no446_a07.g1 PHD_FILE: MSMg01no446_a07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:25 2005
(285 letters)
>mm_chr6_66868190_66868874
Length = 685
Score = 443 bits (229), Expect = e-129
Identities = 252/271 (92%), Gaps = 18/271 (6%)
Strand = Plus / Plus
Query: 1 atgtgcacatgggtacacacacaggtttacacttcaaggtcagaggacaattctgggtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 atgtgcacatgggtacacacacaggtttacacttcaaggtcagaggacaattctgggtag 278
Query: 61 tcagtttgttctctctaccatatttgttctggggatcaaagttagcctgccagccttggt 120
|||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 279 tcagtttgttct------------------ggggatcaaagttagcctgccagccttggt 320
Query: 121 ggtaagcatctctatatctcatagattcctgtttattttttatttgtctttctggttaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtaagcatctctatatctcatagattcctgtttattttttatttgtctttctggttaca 380
Query: 181 ttatccctttgaatacaatgttgaaagtagtggcagtttgtcatcagatgaatggattta 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttagccctttgaatacaatgttgaaagtagtggcagtttgtcatcagatgaatggattta 440
Query: 241 aaaagtattttatatgtatgtatgtatgtat 271
|||||||||||||||||||||||||||||||
Sbjct: 441 aaaagtattttatatgtatgtatgtatgtat 471
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
