Query= MSMg01no446_o10.b1 MSMg01no446_o10.b1 CHROMAT_FILE:
MSMg01no446_o10.b1 PHD_FILE: MSMg01no446_o10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:33 2005
(247 letters)
>mm_chr6_51775904_51776550
Length = 647
Score = 418 bits (216), Expect = e-121
Identities = 237/244 (97%)
Strand = Plus / Plus
Query: 1 gtggtctgagatgtggaagctttgttaaccagtcctgcatccattccagctttccacatg 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 gtggtctgggatgtggaagctttgttaaccagtcctgcatccattccagctttccacgtg 260
Query: 61 gcagtgcatgaccaactgaagcatcctgtgcctgggcatgctatttggcaaggttggcag 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 gcagcgcatgaccaactgaagcatcctgtgcctgggcatgctatttggcaaggctggcag 320
Query: 121 tataaggatcatttttgtgtaattaacctttgattttgtaactacttgtcttatgtctgt 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagaaggatcatttttgtgtaattaacctttgattttgtaactacttgtcttatgtctgt 380
Query: 181 ccaatgtgttttcaggccaaacgtataaagcatgaactattcttcttgctgccttccatt 240
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 381 ccaatgtgttttcaggccaaatgtataaagcatgaactatccttcttgctgccttccatt 440
Query: 241 ctaa 244
||||
Sbjct: 441 ctaa 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no446_o10.g1 MSMg01no446_o10.g1 CHROMAT_FILE:
MSMg01no446_o10.g1 PHD_FILE: MSMg01no446_o10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:33 2005
(353 letters)
>mm_chr6_51956681_51957433
Length = 753
Score = 601 bits (311), Expect = e-176
Identities = 347/369 (94%), Gaps = 16/369 (4%)
Strand = Plus / Minus
Query: 1 tgactgcctcgtggaggagtttagcattgggagacttttgttcctgtacctttttactgt 60
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 692 tgactgcctcgtggaggagtttatcattggaagacttttgttcctgtacctttttactgt 633
Query: 61 tggattaccatggaaaatggttttaaaaaaaa----------------gtgtgtgtgagt 104
||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 632 tggattaccatggaagatggttttaaaaaaaagtgtgtgtgagtgtgtgtgtgtgtgagt 573
Query: 105 gtgtgtgtgtgtgagtgtgatacttgtcctcactcagtctaaaggaaggcagggtggcag 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gtgtgtgtgtgtgagtgtgatacttgtcctcactcagtctaaaggaaggcagggtggcag 513
Query: 165 tttttctaggggttcacgtgtataaagaaaaagaaaacagaaaggagactcagtgggcag 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tttttctaggggttcacgtgtataaagaaaaagaaaacagaaaggagactcagtgggcag 453
Query: 225 ggtgtttaagtgctcacttctcatgtgtcagttgtctgctgagtgattctctgatgtagc 284
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 452 ggtgtttaagtgctcacttctcaggggtcagttgtctgctgagtgattctctgatgtagc 393
Query: 285 tgcacaaagattgctgggctctcagaacacgtcatcttttcattgtgttttcagacctta 344
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tgcacaaggattgctgggctctcagaacacgtcatcttttcattgtgttttcagacctta 333
Query: 345 acatttatg 353
|||||||||
Sbjct: 332 acatttatg 324
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space: 255936
Effective search space used: 255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
