Query= MSMg01no447_c02.b1 MSMg01no447_c02.b1 CHROMAT_FILE:
MSMg01no447_c02.b1 PHD_FILE: MSMg01no447_c02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:52 2005
(366 letters)
>mm_chr6_48924793_48925559
Length = 767
Score = 656 bits (339), Expect = 0.0
Identities = 357/363 (98%), Gaps = 1/363 (0%)
Strand = Plus / Minus
Query: 5 gaattcttgtcc-aatcctgtgtgccggatggctgcagctccagctctgtcctgcccatc 63
|||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 567 gaattcttgtccaaagcctgtgtgccggatggctgcagctccagctccgtcctgcccatc 508
Query: 64 aggaagctgtgcacagcctccatctcctggatgctcaggtctgagaacacctggttcttg 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 507 aggaagctgtgcacagcctccatctcctggatgctcaggtctgagaacacctgggccttg 448
Query: 124 ccattcaacatccagctggggtactctgccatggtctcctgtagaaccaacacaatggcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 447 ccattcaacatccagctggggtactctgccatggtctcctgtagaaccaacacgatggcc 388
Query: 184 atgcagcccagtgccaagctcctttgtgccaaccccatggctctggaactcagcagaaga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 atgcagcccagtgccaagctcctttgtgccaaccccatggctctggaactcagcagaaga 328
Query: 244 gaggagagaacttaggtatatctgtctccaagccagcactcaagagcaccttgtctctaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gaggagagaacttaggtatatctgtctccaagccagcactcaagagcaccttgtctctaa 268
Query: 304 gtcctgtcttatcccccctgactgtgcttcctcccttacgcagctgaagccagagctgga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gtcctgtcttatcccccctgactgtgcttcctcccttacgcagctgaagccagagctgga 208
Query: 364 atc 366
|||
Sbjct: 207 atc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 366
Length of database: 767
Length adjustment: 9
Effective length of query: 357
Effective length of database: 758
Effective search space: 270606
Effective search space used: 270606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no447_c02.g1 MSMg01no447_c02.g1 CHROMAT_FILE:
MSMg01no447_c02.g1 PHD_FILE: MSMg01no447_c02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:52 2005
(277 letters)
>mm_chr6_48767135_48767819
Length = 685
Score = 505 bits (261), Expect = e-147
Identities = 276/285 (96%), Gaps = 8/285 (2%)
Strand = Plus / Plus
Query: 1 ccctaaataggggaaattctccattgtttaggagttagctgtaccttttctttgcatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccctaaataggggaaattctccattgtttaggagttagctgtaccttttctttgcatttt 260
Query: 61 tgcttcagatttctttacttggagccctttgccccagccatgggcacctctggcttcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcttcagatttctttacttggagccctttgccccagccatgggcacctctggcttcttt 320
Query: 121 tttgtggtcatgttactaaagaaataaaataaccaaagcaggtgtagtgacagagtcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgtggtcatgttactaaagaaataaaataaccaaagcaggtgtagtgacagagtcaaa 380
Query: 181 tgtgtgctgttaagagataccagggaagaccaaaaggaaatatt-c-------ctttaat 232
|||||||||||||||||||||||||||||||||| ||||||||| | |||||||
Sbjct: 381 tgtgtgctgttaagagataccagggaagaccaaagggaaatatttctttaatgctttaat 440
Query: 233 gctttaagttaatttttaagctaaggagtagtcaaaacttataaa 277
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctttaagttaatttttaagctaaggagtagtcaaaacttataaa 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 685
Length adjustment: 9
Effective length of query: 268
Effective length of database: 676
Effective search space: 181168
Effective search space used: 181168
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
