This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
Home
SequenceCutter
Blast
Download
MoG+ (mm10) top
RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
Click to search
Search Parameter
BAC name
Region
Chromosome
All
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
Y
-
Gene
search by nearby gene name.
overlap
around
Format
10
20
50
100
ALL
rows / page
Page
1
Search Result
BAC
Clone Name
MSMg01-447G23
Chromosome
6 (Build37)
Map Location
9,783,311 - 9,783,763
singlet/doublet
singlet
Overlap gene
none
Upstream gene
LOC100040238
,
Nxph1
Downstream gene
LOC330264
,
LOC100040285
Link
Open Mouse BAC browser
Click to get alignment info.
name
LOC100040238
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100040238
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs
name
Nxph1
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:18231
MGI:107492
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC330264
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:330264
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 Proteins
pseudo
: _no_value
name
LOC100040285
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100040285
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein
pseudo
: _no_value
name
LOC100040238
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149254846
GeneID:100040238
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs
product
: hypothetical protein LOC100040238
transcript_id
: XM_001474333.1
name
Nxph1
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:142357588
GeneID:18231
MGI:107492
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: neurexophilin 1
transcript_id
: NM_008751.3
name
LOC100040238
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149254847
GeneID:100040238
definition
codon_start
: 1
product
: hypothetical protein
protein_id
: XP_001474383.1
name
Nxph1
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:45598386
GeneID:18231
MGI:107492
definition
GO_function
: GO:0005102 - receptor binding [Evidence IDA]
codon_start
: 1
exception
: mismatches in translation
product
: neurexophilin 1
protein_id
: NP_032777.2
name
LOC330264
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:330264
definition
number
: 1
pseudo
: _no_value
name
LOC100040285
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100040285
definition
number
: 2
pseudo
: _no_value
name
LOC100040285
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100040285
definition
number
: 1
pseudo
: _no_value
name
(CDS detail)
type
STS
link
xref
UniSTS:143937
definition
standard_name
: Mx1
name
(CDS detail)
type
STS
link
xref
UniSTS:224995
definition
name
(CDS detail)
type
STS
link
xref
UniSTS:159482
definition
standard_name
: RH118299
name
(CDS detail)
type
STS
link
xref
UniSTS:207928
definition
standard_name
: AU017803
name
(CDS detail)
type
STS
link
xref
UniSTS:130809
definition
standard_name
: D6Mit260
name
(CDS detail)
type
STS
link
xref
UniSTS:130779
definition
standard_name
: D6Mit233
name
(CDS detail)
type
STS
link
xref
UniSTS:124597
definition
standard_name
: 45.MMHAP90FRG12.seq
name
(CDS detail)
type
STS
link
xref
UniSTS:130748
definition
standard_name
: D6Mit203
name
(CDS detail)
type
STS
link
xref
UniSTS:122870
definition
standard_name
: 06.MMHAP84FRB9.seq
clone name
MSMg01-316P11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-054E08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-061B24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-503O19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-062O19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-086G05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-450N06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-211B07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-524A14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-300A24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-058B18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-462B22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-299C07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-358G07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-169K23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-446H11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-097M22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-233A19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-345K20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-327P17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-465I20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-468E16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-512J11
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-388P12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-140H04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-510L08
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-472B23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-289E04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-349J20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-415O17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-092I02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-471L20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-369O24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-349C22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-467A13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-434G14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-521I02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-164B13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-397D09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-458C01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-539H03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-499F20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-377B19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-530P10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-452K18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-126J12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-074C20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-071K17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-071J17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-107O06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-092K19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-447G23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-395G14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-301M14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-140G08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-439L14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-117D09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-471J15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-498B17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-529D13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-068F05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-380P02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-144F13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-163K03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-262E24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-126E22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-126A07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-169P08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-320E07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-232E11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-422J22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-363A16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-440C01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-454H12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-434G19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-297A14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-430D03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-098G06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-205J17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-473O20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-235D06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-137J18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-129P12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-468M24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-331P03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-037E07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-245E11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-085M03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-275J12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-201O17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-163M17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-057H08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-212M09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-301L15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-181M03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-274P11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-112F17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-253N23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-094E19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-270D05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-300M16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-267I03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-216L11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-164G08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-331L01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-322O16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-173M09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-074K16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-283P01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-181J19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-149N22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-011J08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-194P14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-268O05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-261H07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-274G08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-237D07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-343E17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-166D13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-089K05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-039J03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-137C10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-186L01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-129O06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-097M08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-040P06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-041N22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-223H04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-109B18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-050A12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-142H11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-012M04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-025J02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-075L20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-200F08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-341J20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-111E10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-297H23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-176D22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-282B03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-168O22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-099M21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-300H01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-279C08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-302H03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-074A19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-343E15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-076H10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-279L24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-009G01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-263B23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-018B04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-200B10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-295C21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-146A20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-005N08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-105E10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-020J14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-194N23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-347A18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-124P20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-276C06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-249I05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-022O08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-268C23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-212E11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-310P09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-121M14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-067N13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-003H15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-216F12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-111P24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-124A22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-213O05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-077K12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-276K08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-058O16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-198O12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-007I14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-174G20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-121N21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-304P17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-317O01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-086P08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-302L09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-036M02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-047G21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-147F15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-252E04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-323A04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-199B11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-055L21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-139M14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-260E05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-059N09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-260K13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-268G08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-080K21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-234B20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-277N16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-049I17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-106N09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-187A16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-109C24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-048O05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-348C02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-256I21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-051N23
singlet/doublet
singlet
plural/unique
unique