Query= MSMg01no447_i10.b1 MSMg01no447_i10.b1 CHROMAT_FILE:
MSMg01no447_i10.b1 PHD_FILE: MSMg01no447_i10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:27 2005
(460 letters)
>mm_chr6_107327670_107328532
Length = 863
Score = 849 bits (439), Expect = 0.0
Identities = 456/463 (98%), Gaps = 3/463 (0%)
Strand = Plus / Plus
Query: 1 actttttgttagcctctgagactccgattaaacatatagctcctcctggaaggttctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actttttgttagcctctgagactccgattaaacatatagctcctcctggaaggttctctt 260
Query: 61 ttgcttcccataataccatgcactcatgccaacaccttcttctctgtagagaacacctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgcttcccataataccatgcactcatgccaacaccttcttctctgtagagaacacctca 320
Query: 121 ctgtaccatggccaccaaaagttgcaactcttgcaggcccagtcttaaatctattttgct 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 ctgtaccatggccaccaaaagttgcaactcttgcaggcccagttttaaatctattttgct 380
Query: 181 gttttcccttgtagcctcactagtttttaaacaaaggtaatactgtaattgctagcaact 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 gttttcccttgtagcctcactagtttttaaacaaaggtaataatgtaattgctagcaact 440
Query: 241 cctaccttgatatctctgacactgatgccatcttttgactcttcctttcacttaatcttc 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctaccttgatacctctgacactgatgccatcttttgactcttcctttcacttaatcttc 500
Query: 301 tctccctcctactctcaatcaactaatcctgacatcttc---cagtacacctaaagcatc 357
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 tctccctcctactctcaatcaactaatcctgacatcttcttccagtacacctaaagcatc 560
Query: 358 aatctcagatcaaacctttctttacgctcctattatacacgctattgttacacttctagg 417
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 561 aatctcagatcaaacctttctttaagctcctattatacacgctattgttacacttctagg 620
Query: 418 aggaaaccaggttaggttgctaagtgtctttggtcataatgtt 460
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggaaaccaggttaggttgctaagtgtctttggtcataatgtt 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 863
Length adjustment: 10
Effective length of query: 450
Effective length of database: 853
Effective search space: 383850
Effective search space used: 383850
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no447_i10.g1 MSMg01no447_i10.g1 CHROMAT_FILE:
MSMg01no447_i10.g1 PHD_FILE: MSMg01no447_i10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:27 2005
(314 letters)
>mm_chr6_107483812_107484525
Length = 714
Score = 572 bits (296), Expect = e-168
Identities = 308/312 (98%)
Strand = Plus / Minus
Query: 1 catccaagttaaatgttttatggtagtaatggtactggatgaaaagcttctacaatcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 catccaagttaaatgttttatggtagtaatggtactggatgaaaagcttctacaatcatt 453
Query: 61 ctgactgattgtggtagttagtcctttcaaccccatttgcccagacactctatgttacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ctgactgattgtggtagttagtcctttcaaccccatttgcccagacactctatgttacaa 393
Query: 121 ctaaggaatctcaaagttggcaaggtaaggaagacataccagatcatttaggtataattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ctaaggaatctcaaagttggcaaggtaaggaagacataccagatcatttaggtataattg 333
Query: 181 gtaatagcctatttatcaaccaagtaactggtaaaatcatacaaagtcaataaattatta 240
||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 332 gtaatagcctatttatcaatcaagtaactggtaaaatcatacaaggtcaataaattatta 273
Query: 241 tgtctatatctcttgagacatgcaaactaaacccagaatggtgatatgaaagatatgaga 300
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 272 tgtctatatctcttgagacataaaaactaaacccagaatggtgatatgaaagatatgaga 213
Query: 301 gagggagaggga 312
||||||||||||
Sbjct: 212 gagggagaggga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
