Query= MSMg01no448_e23.b1 MSMg01no448_e23.b1 CHROMAT_FILE:
MSMg01no448_e23.b1 PHD_FILE: MSMg01no448_e23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:33 2005
(431 letters)
>mm_chr6_81684852_81685682
Length = 831
Score = 667 bits (345), Expect = 0.0
Identities = 345/345 (100%)
Strand = Plus / Minus
Query: 1 tttttgtatagttcttttgaaaatgtattcaatgcctttagaacaagattctatttctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tttttgtatagttcttttgaaaatgtattcaatgcctttagaacaagattctatttctat 286
Query: 61 tatgcctataactcataaagtttgtcttctcagaatgttctatcatcttgacattcccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tatgcctataactcataaagtttgtcttctcagaatgttctatcatcttgacattcccat 226
Query: 121 gggcaccttccagttctctactttttcttcaagctcagatattctgtcctctcctgatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 gggcaccttccagttctctactttttcttcaagctcagatattctgtcctctcctgatcc 166
Query: 181 actccactgttgatacttttcatggagctttttatttgactttactgtttttcatttcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 actccactgttgatacttttcatggagctttttatttgactttactgtttttcatttcca 106
Query: 241 gcctttcagattgttttctctgcagcatttctgtctctgttggattcctatctcatgcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 gcctttcagattgttttctctgcagcatttctgtctctgttggattcctatctcatgcca 46
Query: 301 tccattgcctttctcaattcattcaggtgtctgtgtgtttgacca 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 tccattgcctttctcaattcattcaggtgtctgtgtgtttgacca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space: 346884
Effective search space used: 346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_e23.g1 MSMg01no448_e23.g1 CHROMAT_FILE:
MSMg01no448_e23.g1 PHD_FILE: MSMg01no448_e23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:33 2005
(373 letters)
>mm_chr6_81553866_81554639
Length = 774
Score = 687 bits (355), Expect = 0.0
Identities = 370/375 (98%), Gaps = 3/375 (0%)
Strand = Plus / Plus
Query: 1 tcttgttcaaatgttgcaacg-agtttccagttgagtagcatggagcattgacctatgtg 59
||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||
Sbjct: 201 tcttgttcaaatgttgcaacgca-tttccagttgtgtagcatggagcattgacctatgtg 259
Query: 60 tgaggcttctaagcaatggagccacatggggctgcccaggcctggcccccatggagctag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgaggcttctaagcaatggagccacatggggctgcccaggcctggcccccatggagctag 319
Query: 120 ccaaaacccatctgcagcaaacagatcatagttacttgacctaaaggccacagatctagg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ccaaaacccatctgcagcaaacagatcatagttacttgacctaaaggccacagatctagg 379
Query: 180 ctgacccatccccaggatatctggtgtaaaaagacctcaatgaagttctcagtcctccca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctgacccatccccaggatatctggtgtaaaaagacctcaatgaagttctcagtcctccca 439
Query: 240 atgaggagagtcagtcggacagatggttttgaagagttgaacattgggagataggaggag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atgaggagagtcagtcggacagatggttttgaagagttgaacattgggagataggaggag 499
Query: 300 agaaaaaa-ctatagaggtgtgaacctatctgacatattgtcactgcagggaaaacacct 358
|||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 500 agaaaaaaactatagaggtgtgaacctatctgacatattgtcactgcagtgaaaacacct 559
Query: 359 tccttccactactct 373
|||||||||||||||
Sbjct: 560 tccttccactactct 574
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 774
Length adjustment: 9
Effective length of query: 364
Effective length of database: 765
Effective search space: 278460
Effective search space used: 278460
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
