Query= MSMg01no448_g07.b1 MSMg01no448_g07.b1 CHROMAT_FILE:
MSMg01no448_g07.b1 PHD_FILE: MSMg01no448_g07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:39 2005
(400 letters)
>mm_chr6_24300656_24301455
Length = 800
Score = 708 bits (366), Expect = 0.0
Identities = 387/394 (98%), Gaps = 4/394 (1%)
Strand = Plus / Minus
Query: 5 ggaattctcctttctccaa-aatatcttgttta-aataagataattcccttgtgtgcttg 62
||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 596 ggaattctcctttctagaataatatcttgtttacaataagataattcccttgtgtgcttg 537
Query: 63 ctgtgacctgggacaggttagtgcatatagagagattttatacaatacagtcccagctgt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ctgtgacctgggacaggttagtgcatatagagagattttatacaatacagtcccagctgt 477
Query: 123 tgcgacggtgtagccttctgcagtttttcagaacagcctctagaggtcaggattgaggca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tgcgacggtgtagccttctgcagtttttcagaacagcctctagaggtcaggattgaggca 417
Query: 183 ctgtgcatagcttagcctcccctctcactacctagccagttataatgggatcagcgctga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ctgtgcatagcttagcctcccctctcactacctagccagttataatgggatcagcgctga 357
Query: 243 gacttagttctccatatggtgacattcatatctactgtaaggattgttccccccataaga 302
|||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 356 gacttagttctccatatggtgacattcata-c-gctgtaaggattgttccccccataaga 299
Query: 303 tttaattataacaatctaatatgcaataataattcgctgctattagacatttaaaatata 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tttaattataacaatctaatatgcaataataattcgctgctattagacatttaaaatata 239
Query: 363 tatgatttatatatgtagtccgcattgattcctt 396
||||||||||||||||||||||||||||||||||
Sbjct: 238 tatgatttatatatgtagtccgcattgattcctt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space: 309281
Effective search space used: 309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_g07.g1 MSMg01no448_g07.g1 CHROMAT_FILE:
MSMg01no448_g07.g1 PHD_FILE: MSMg01no448_g07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:39 2005
(350 letters)
>mm_chr6_24081902_24082651
Length = 750
Score = 630 bits (326), Expect = 0.0
Identities = 344/350 (98%)
Strand = Plus / Plus
Query: 1 ctactgtgtttcagataatggatatgctaaggttaaaaccagaatacagtagacctgttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctactgtgtttcagataatggatatgctaaggttaaaaccagaatacagtagacctgttc 260
Query: 61 ttatagacatggagtttgcaatcatcgcttacagattgtcctctttccagactcaagcac 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 ttatagacatggagtttgcaatcatctcttacagattgtcctctttccagactcaagcac 320
Query: 121 tttatctaataccccttctccatgatatgcacacattaaactaattgtgctactttttgg 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 tttatctaataccccttctccatgatatgcacatattaaactaattgtgctactttttgg 380
Query: 181 aaagcttgggttttggcgaaacttgtagcttttttgtgtccatatcattgttttgcattc 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 aaagcttgggttttggcgaaacttgtagcttttttgtgtccaaatcattgttttgcattc 440
Query: 241 tctaggttctgagatatttatattaaagagtagtctgtttgtaacatctctccctacaaa 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctaggttctgagatatttatattaaagagtagtctgtttgtaacatctctccctacaaa 500
Query: 301 gcccagaacacattgggtagcaaatcaatttgtacttaaattttaggcat 350
|||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 501 gcccagaacacattggatagcaaatcaatttgaacttaaattttaggcat 550
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
