NNCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTTCAAATCCGC
GGAATTCCAGCATGGTTTCCATCTAACTTCATACTTTTGACTCTAAGAAG
ACTGTGAAATGAACATGATTTTAATTAGCATCTATCTGTTGAATGATGTG
CATCACAGGAAAATGAACGTCTTTGCAGAAATATGGACTAGAAAGAGATT
TAAAACAAATCGGCAGACAATGACTGGCTGGGTTGCTGCTAATATTTTTA
TTCAACTCCCAAAGCCCAGCAGAACTGAATGTCCACTGAGGAGGGACCTG
TGCCACCACTGGTCATCACGAACTTATTTCGTATGCTAACCAGTTACCAA
ACAGATGAAGCCCAAATTGAAGTCCTTGATCCAGGAATCGGGGGTCTACT
TCAGTCAGGACACCATTTGCCCAAACACATGTGGGCCAGGTCCAACCCTA
CAGCAAAAACAATGCATCTGCTCCCGCTGGGAATGACTGTCAAAACCTAG
GCAATTAGGACAAAGACACTGGGTGCCTCCTGCAGACTAGTGATCTTCAT
ATCTGAGTCTCCTGCTTTAGNCATCACGTGTGAGCTTCTCCTTGGCACCT
TCACCCACTCTGACAGATGTCAGGCCACATCCTGGTCTCTCACCCCACAG
GACCTGAAATTGTTTTGGCAATTGCCTTCCCCCCCTAGCCTGAATAAAAG
GATAAAATTAATTTCTCCCCTTTGGGGCTTCCCCCGGATCCCTN

NCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATGCAGTTGAATCCTTCTTAACAGTC
TGTTTTACGGGAACCTTTATTACCGCGACCCGCAGTTCTGGTTCTGGAAT
GAGGGATCTTCCTTGCGCCGGTGATGGTAATTTTCGTCCCAGGTTTTCTC
TTCCCGGGGTTTTCTCGTCCCGGGTTTTTTCTCGTCCCGGGTTTCAGCAC
CAATTCTTAATAGCATTCGCACGCCCGGCCAGGAAGAACACAACAAACCA
GAATCTTCTGCGGCATTTTTTTATTGCTTACATCTTCAGGAGCCAGGAGC
GCAAACCCCCAGCCCCAAAAGCGAAAGCCACCCCAATAATGAAACCGAAA
CCCCTTCCCTATTTAGGAGAGTTATATTTCGCCTAGGACGCATCACTCCC
TGATTGGCTGCAGCCCATGGCCGAGCTGACGTTCACGGGAAAGGCAGAGT
ACAAGTAGTCGTAAAATACCCTTGGTACATGCGCAGATTATTTGTTTACC
ACTTAGAACACAGGATGTCAGCGCCATCTTATGACGGCGAATGTNGGGGC
GGCTCCCAACACTTCCTCTCCCTCCCAGGCAGATAAGGGAGGCCCAGTTT
GTCTAGTAAATCCCCACACCCGGGGAACAGCTTTTTGGGATACTCGCCCC
TCCCGGCTGTGGGGGGACTTCACGTGAAAACAAGGAGGCCATTTTGTTTC
TTTGGTGGGGGGGA

Query= MSMg01no448_p14.b1 MSMg01no448_p14.b1 CHROMAT_FILE:
MSMg01no448_p14.b1 PHD_FILE: MSMg01no448_p14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:26 2005
         (485 letters)



>mm_chr6_143635694_143636578
          Length = 885

 Score =  893 bits (462), Expect = 0.0
 Identities = 477/482 (98%)
 Strand = Plus / Minus

                                                                       
Query: 4   gaattccagcatggtttccatctaacttcatacttttgactctaagaagactgtgaaatg 63
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gaattccagcatggttaccatctaacttcatacttttgactctaagaagactgtgaaatg 626

                                                                       
Query: 64  aacatgattttaattagcatctatctgttgaatgatgtgcatcacaggaaaatgaacgtc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aacatgattttaattagcatctatctgttgaatgatgtgcatcacaggaaaatgaacgtc 566

                                                                       
Query: 124 tttgcagaaatatggactagaaagagatttaaaacaaatcggcagacaatgactggctgg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttgcagaaatatggactagaaagagatttaaaacaaatcggcagacaatgactggctgg 506

                                                                       
Query: 184 gttgctgctaatatttttattcaactcccaaagcccagcagaactgaatgtccactgagg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gttgctgctaatatttttattcaactcccaaagcccagcagaactgaatgtccactgagg 446

                                                                       
Query: 244 agggacctgtgccaccactggtcatcacgaacttatttcgtatgctaaccagttaccaaa 303
           ||||||||||||||||||||||||||||||||| |   ||||||||||||||||||||||
Sbjct: 445 agggacctgtgccaccactggtcatcacgaactgacaccgtatgctaaccagttaccaaa 386

                                                                       
Query: 304 cagatgaagcccaaattgaagtccttgatccaggaatcgggggtctacttcagtcaggac 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagatgaagcccaaattgaagtccttgatccaggaatcgggggtctacttcagtcaggac 326

                                                                       
Query: 364 accatttgcccaaacacatgtgggccaggtccaaccctacagcaaaaacaatgcatctgc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 accatttgcccaaacacatgtgggccaggtccaaccctacagcaaaaacaatgcatctgc 266

                                                                       
Query: 424 tcccgctgggaatgactgtcaaaacctaggcaattaggacaaagacactgggtgcctcct 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcccgctgggaatgactgtcaaaacctaggcaattaggacaaagacactgggtgcctcct 206

             
Query: 484 gc 485
           ||
Sbjct: 205 gc 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space:   415625
Effective search space used:   415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)