Query= MSMg01no449_c10.b1 MSMg01no449_c10.b1 CHROMAT_FILE:
MSMg01no449_c10.b1 PHD_FILE: MSMg01no449_c10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:41 2005
(194 letters)
>mm_chr6_98944456_98945049
Length = 594
Score = 375 bits (194), Expect = e-109
Identities = 194/194 (100%)
Strand = Plus / Plus
Query: 1 gggcttctcccctacaaaggcccacaaagccaggcttgggggaagacagatgcaaaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gggcttctcccctacaaaggcccacaaagccaggcttgggggaagacagatgcaaaaaac 260
Query: 61 aaacactgcacagagcagctggggaacagcgcagatgagcatttttatgaatcttgagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaacactgcacagagcagctggggaacagcgcagatgagcatttttatgaatcttgagat 320
Query: 121 gacaacaacttgacgtcctagcactggccccggtattgacttaggaacatgggaacttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacaacaacttgacgtcctagcactggccccggtattgacttaggaacatgggaacttgc 380
Query: 181 catttatatgagaa 194
||||||||||||||
Sbjct: 381 catttatatgagaa 394
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no449_c10.g1 MSMg01no449_c10.g1 CHROMAT_FILE:
MSMg01no449_c10.g1 PHD_FILE: MSMg01no449_c10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:41 2005
(439 letters)
>mm_chr6_99079234_99080072
Length = 839
Score = 822 bits (425), Expect = 0.0
Identities = 435/439 (99%), Gaps = 2/439 (0%)
Strand = Plus / Minus
Query: 1 tcccctctctcatcccttattccttatagcttgatggccttaatgaaaaaaaaaaaaact 60
||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 806 tcccctctctcatcccttattccttatagcttgatggccttaagg--aaaaaaaaaaact 749
Query: 61 aagagttgacagagactcaaaaagaaaataaatttacatgaagcaagtatgattgcggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 aagagttgacagagactcaaaaagaaaataaatttacatgaagcaagtatgattgcggtg 689
Query: 121 catgatgtgaaatttccaaataattaataaaaatattatgttgggaaaatatagatgcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 catgatgtgaaatttccaaataattaataaaaatattatgttgggaaaatatagatgcat 629
Query: 181 ggatggatcagtgatcaatgacctgctgtccgaagcatgttgctctctctttcactctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ggatggatcagtgatcaatgacctgctgtccgaagcatgttgctctctctttcactctgg 569
Query: 241 ctgagtatgtcctcatggttctagctgtggcacctttcttggctcacatgcagaccgcac 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ctgagtatgccctcatggttctagctgtggcacctttcttggctcacatgcagaccgcac 509
Query: 301 caccccagccagcatgccagcatgctgcttctcctggatagcgtcaccttatgtggattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 caccccagccagcatgccagcatgctgcttctcctggatagcgtcaccttatgtggattc 449
Query: 361 gcttgtaatgtcactggcagtgaattccagcaaaggcagaccttgtttctcccctgacct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gcttgtaatgtcactggcagtgaattccagcaaaggcagaccttgtttctcccctgacct 389
Query: 421 gttgtgtctctccctaagt 439
|||||||||||||||||||
Sbjct: 388 gttgtgtctctccctaagt 370
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
