NNNNCCTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAAAATCC
GCGGAATTCCTCCTGAATTGCGAACGAGATTACGGGGAAGGAGACAGTAG
GCCCCATTCTCCAATCCTGATTGATCTGAAAAGAAAAGTGCTTCAGATCT
TGAGTCCATGCACCCGGAAAAAGAGAGCCGGCTCTGACTCGTCCACATTG
GGGCAGACAAGAGCCCGTGCAGGAATTTCTAAACTGCATATCTTCCCCAG
CTACTGGTGATTTGTTATTTATTATTTCCATCTGTGTGCAGTGGTGTTTA
CATGTTTGTGCTTGTGCGAGTGGGGGATGTTATACACGTGCGTGCGGAAG
CGGCATGTCCGTGTTGGGTGACCTCTGAGAGTATCTCATTGTACCCTCAG
CCCCAGAATATGGCTAGACTGGCTAAGTTCCCATGATCCTCCTCCCCACA
CAGCACTTAAAGATGGGTGGCCATGCCAGCTTCTTTTCCTCGGGTGCTGG
GAATTTAAACTCCTGTCCCCATGCTTGCTCAGCAAGCACTTTACCTGCTG
AGCCATCTCCTCACCCCTGACTCTTTCGTTTGATTTGAGAATTCTCTGTG
TCCTCAAAATACACAGTTTTGGAGCCCATCCCGAAACAGAAATTCTTCTC
CCTCTCCCCCCTCCCCTTTTCTNCTTTNCCTNTNNNNTTTTNNNANNNNN
NNNTTTTTTTTTTCCTTCTCTTTTTTCTTCTTCCCCTCTTCCCTCTTTAT
TTTTCTCTCTTCTTTTC

NNNNTTCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXATAGAGCTCTGCCTGCCTCTGC
CTCCTGAGTACTGGGATTAAAGTGATATGTCATTACATCAGACTCCTCCT
TAGTCTTTGACACAGGATGTATTTGTTACTTTTTGTTGCTGTCAGGAAAT
TCCCTGACCCAAAGTGACTTAAGAGGGAAGAGTTTACAGAGGGAGAGTCC
ATGATGACAGAGGAGGCGTGGTGAGCAGGCTGCTGGAGCTGAAAGCTGAG
AACGCACACCTTCACGCCTTCACACCTTCTTATTATGCCTTCACACCTTC
AATCCGGAGAGAGACCAAACTAGAAGTGGGGTGAAGCAATACCCTCCAAC
CCCCAGAGACGAAGTAACAAGGTTCACCAGCCTCCCCAAACAGTAGTACC
AACTGGGGACCAAGTGTTCAAACTTGATGAGCCCATGGAGAGATTTCTCA
CTGAAATGACCGAGAGATGATAGAGATGGNNGGCGGGTTTTTCCCAAACC
TAGCCAGGACTTGCCACTTTTGCCGATCGGATGGTTGGAAGCCTTGCGTA
CAGACAACAGAAGGCACAAGGAAACTTTGGGCCTTTTTCCCTATTTCCCT
ATACCCCAATTTTTTAAGGAAGAATTTTCAAACCCCAAATTCCCTTTTTT
TTTTAAGNTTGGAAGGGTGAGGGAAACTTGGTAGAACTTTTCTGTCCCCC
CAATTCCCCCCCCACAAACCGGGTATAGAAAAACCTCTTGCCCTTT

Query= MSMg01no449_n21.b1 MSMg01no449_n21.b1 CHROMAT_FILE:
MSMg01no449_n21.b1 PHD_FILE: MSMg01no449_n21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:36 2005
         (530 letters)



>mm_chr6_139993101_139994031
          Length = 931

 Score =  907 bits (469), Expect = 0.0
 Identities = 515/531 (96%), Gaps = 3/531 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   gaattcctcctg-aattgcgaacgagattacggggaaggagacagtaggccccattctcc 61
           |||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattcctcctgaaatggagaacgagattacggggaaggagacagtaggccccattctcc 262

                                                                       
Query: 62  aatcctgattgatctgaaaagaaaagtgcttcagatcttgagtccatgcacccggaaaaa 121
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aatcctgactgatctgaaaagaaaagtgcttcagatcttgagtccatgcacccggaaaaa 322

                                                                       
Query: 122 gagagccggctctgactcgtccacattggggcagacaagagcccgtgcaggaatttctaa 181
            |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 323 aagagccggctctgactggtccacattggggcagacaagagcccgtacaggaatttctaa 382

                                                                       
Query: 182 actgcatatcttccccagctactggtgatttgttatttattatttccatctgtgtgcagt 241
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 383 actgcatatcttccccagctattggtgatttgttatttattatttccatctgtgtgcagt 442

                                                                       
Query: 242 ggtgtttacatgtttgtgcttgtgcgagtgggggatgttatacacgtgcgtgcggaagcg 301
           ||||||||||||||||||||||||||||||||||||| ||| | ||||||||| ||||||
Sbjct: 443 ggtgtttacatgtttgtgcttgtgcgagtgggggatggtattcccgtgcgtgcagaagcg 502

                                                                       
Query: 302 gcatgtccgtgttgggtgacctctgagagtatctcattgtaccctcagccccagaatatg 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gcatgtccgtgttgggtgacctctgagagtatctcattgtaccctcagccccagaatatg 562

                                                                       
Query: 362 gctagactggctaagttcccatgatcctcct--ccccacacagcacttaaagatgggtgg 419
           |||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||
Sbjct: 563 gctagactggctaagttcccatgatcctcctgtccccacacagcacttacagatgggtgg 622

                                                                       
Query: 420 ccatgccagcttcttttcctcgggtgctgggaatttaaactcctgtccccatgcttgctc 479
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ccatgccagcttcttttcctcaggtgctgggaatttaaactcctgtccccatgcttgctc 682

                                                              
Query: 480 agcaagcactttacctgctgagccatctcctcacccctgactctttcgttt 530
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 agcaagcactttacctgctgagccatctcctcacccctgactctttcgttt 733


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 931
Length adjustment: 10
Effective length of query: 520
Effective length of database: 921
Effective search space:   478920
Effective search space used:   478920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)