CATTTTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAGAAAGATCATGAGCCTTGAACAAAGAAGTTAGGACCTGT
CAGCAAAAGAGAAATCTAGGATATTTTGAAATGAAAGATTTTTTTTCCTG
CTTCAGCTATGCCCTCATAACTTCTACCCTCTTTTCAATCAATCAGCTTC
ATCAGCTCTTTAGGTTCATGTTCCATTGTGGCCAGGAATTCAACAAGAAC
AGTTATTATCATGAGATAACATTTTCTGAGTTCAAGTTGAGGTCAGCATG
AGTGAATTGGATGGGCCTAACAACATTAAAGAATTCTCAGATTCAGTGGG
TCCTTTAACACCAATTATTAATTGTGTCTAGTACCCTAGAACTAGTGATG
AGTTCTCCTTTAGACAGATAGCTCGTGGCTGATGACAGCTAGGTCACATG
ACCCACAACTATGTATTAGATATTACCTGCATCAGAAGAATTTAACTAAG
CCTCAGTACCAGGCAGGAACAATCTTCATTCAAGTTGTTAGATGAGAGAG
CCAAAATAATATAGACTACTGTCATTGCCCCTAGTTGCTTCCCCAGGATG
AATGTTAATTTCTTATTGTTGGCACTCCCTATCTCCAGTATACAGGGATT
CTCAAGATTCCAGGTTGAACCAATTTTAAAAGCCCCCTCTCAAGGGGGAA
TCACTTTCCCATGAAACGTAAAATACTTTACGAAACGCATCCCTAAAATA
AAGTAAATAACAAATATTCTTTTC

NTTTCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTTAAATAAATGGAATGC
TTTATTGCCCTCAAATAAACAATAGATGTTTTAATATATTTTTATTTTAT
TTTTAGTTAGTTTATTTATTTACATTCCAAATGTTGCCCCCGCTCCTGGG
CTCCCTTCCCAGAGTACTGCACCCTATCCCCCTCCACTTTATCTCCGAGA
AGGTGCTCCACTATTCCCACCCCTTGTTACAGGGCATCCCCCTTCCCTGG
GGCATTCAGTCTCTATAGGATTTGGCATATTTTCTCCCACTGATGCCAGA
CAAGACATGATCTCTGCTGCATATGTGTCTGGGGCCTCTGAGTAGCCCAT
ATGTTCTCTTTGGTTGGTGGCTTAGTCTGTGGGAGTTCTCAGGATTACAG
GTTAGTTGACATTGTTGAACACATATGGGGTTGCCATCCACTTCAGCTAC
TTCAAATTTTCTCCTAATTCCTCCATATGTTATTAAAACATATTTGTATA
TTGACTATGTTTTCTCCGTCTGCTTTTAACATGATTTTTTTTCCCCACTT
TATTGTCTAACATGATACTCTCCGCTTTTTCTTTGGAAACTTATTAACAC
TTGTATTTACCCCTGTTTTGTGACCACCTCTTTCCTTAATTCCTCTTTCT
GTGGTCTTTTCCGCCCTCTACTATCTTTTTCCTTTCCTCGTTTCTCCTTC
TACCTTTCTTTATTTCGTCATCCAACCCCTTCTT

Query= MSMg01no449_p03.b1 MSMg01no449_p03.b1 CHROMAT_FILE:
MSMg01no449_p03.b1 PHD_FILE: MSMg01no449_p03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:42 2005
         (458 letters)



>mm_chr6_110780853_110781710
          Length = 858

 Score =  862 bits (446), Expect = 0.0
 Identities = 452/454 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcagaaagatcatgagccttgaacaaagaagttaggacctgtcagcaaaagagaaa 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gaattcagaaagatcatgagccttgaacaaagaagttaggacctgtcagcaaaagagaaa 599

                                                                       
Query: 65  tctaggatattttgaaatgaaagattttttttcctgcttcagctatgccctcataacttc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tctaggatattttgaaatgaaagattttttttcctgcttcagctatgccctcataacttc 539

                                                                       
Query: 125 taccctcttttcaatcaatcagcttcatcagctctttaggttcatgttccattgtggcca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 taccctcttttcaatcaatcagcttcatcagctctttaggttcatgttccattgtggcca 479

                                                                       
Query: 185 ggaattcaacaagaacagttattatcatgagataacattttctgagttcaagttgaggtc 244
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 478 ggaattcaacaagaacagttattatcacgagataacattttctgagttcaagttgaggtc 419

                                                                       
Query: 245 agcatgagtgaattggatgggcctaacaacattaaagaattctcagattcagtgggtcct 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 agcatgagtgaattggatgggcctaacaacattaaagaattctcagattcagtgggtcct 359

                                                                       
Query: 305 ttaacaccaattattaattgtgtctagtaccctagaactagtgatgagttctcctttaga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ttaacaccaattattaattgtgtctagtaccctagaactagtgatgagttctcctttaga 299

                                                                       
Query: 365 cagatagctcgtggctgatgacagctaggtcacatgacccacaactatgtattagatatt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 cagatagctcgtggctgatgacagctaggtcacatgacccacaactatgtattagatatt 239

                                             
Query: 425 acctgcatcagaagaatttaactaagcctcagta 458
            |||||||||||||||||||||||||||||||||
Sbjct: 238 tcctgcatcagaagaatttaactaagcctcagta 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space:   379904
Effective search space used:   379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)