Query= MSMg01no450_p07.b1 MSMg01no450_p07.b1 CHROMAT_FILE:
MSMg01no450_p07.b1 PHD_FILE: MSMg01no450_p07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:03 2005
(244 letters)
>mm_chr6_34737755_34738398
Length = 644
Score = 449 bits (232), Expect = e-131
Identities = 241/244 (98%)
Strand = Plus / Minus
Query: 1 caggagtttggtaagcaaatatatttagaattattagacgccagaaatataactgttcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 caggagtttggtaagcaaatatatttagaattattagacgccagaaatataactgttcta 385
Query: 61 atctgaaaggataaaactggaagtattatcaagtaaccagaatgtacagacttcctccat 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 384 atctgaaaggataaaactggaagtattatcaagtaaccagaatgtagagacttcctccat 325
Query: 121 cctgaggcactgatgttaatcactaaggaccaaataaaggttgagaatgcgtgctagaat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cctgaggcactgatgttaatcactaaggaccaaataaaggttgagaatgcgtgctagaaa 265
Query: 181 cgcaagaacaagatgcaccaaggatgtaaaagtgagctgtccagctagagagaggcaaag 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cgcaagaacaagatgcatcaaggatgtaaaagtgagctgtccagctagagagaggcaaag 205
Query: 241 ttgc 244
||||
Sbjct: 204 ttgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no450_p07.g1 MSMg01no450_p07.g1 CHROMAT_FILE:
MSMg01no450_p07.g1 PHD_FILE: MSMg01no450_p07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:03 2005
(419 letters)
>mm_chr6_34570003_34570821
Length = 819
Score = 779 bits (403), Expect = 0.0
Identities = 413/417 (99%), Gaps = 2/417 (0%)
Strand = Plus / Plus
Query: 1 taggccagtgttggggctcaaacatggcatgggtgaccactgattcccaaagaaagcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taggccagtgttggggctcaaacatggcatgggtgaccactgattcccaaagaaagcatg 260
Query: 61 tggaagtaagggttaaaagacagggaaggattttactttacacaatagagatgagattaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggaagtaagggttaaaagacagggaaggattttactttacacaatagagatgagattaa 320
Query: 121 gcatctcagcacatcctccgggtattgacttgagctttaggaggaactgggtcaaggggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcatctcagcacatcctccgggtattgacttgagctttaggaggaactgggtcaaggggc 380
Query: 181 aagacataagccttattaagtagttttggtcagggtgtggtctggttgatcattatctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagacataagccttattaagtagttttggtcagggtgtggtctggttgatcattatctca 440
Query: 241 gttctggttctgcaagatggcttgaagaagtccttattgcttgaggggaaaatccagttg 300
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 gttctggttctgcaagatggcttgaagaagtccttattgcttgaggggacaatccagtta 500
Query: 301 ccatgagatgattgcttctgcttggaagtgacctcatcctgggtggcctgctgtgtcttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccatgagatgattgcttctgcttggaagtgacctcatcctgggtggcctgctgtgtcttg 560
Query: 361 gattccaaggtgactgcaggcttaggagagtgaatagagacatttttgggggggggg 417
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 561 gattccaaggtgactgcaggcttaggagagtgaatagagacattt--gggggggggg 615
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
