Query= MSMg01no451_a18.b1 MSMg01no451_a18.b1 CHROMAT_FILE:
MSMg01no451_a18.b1 PHD_FILE: MSMg01no451_a18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:10 2005
(696 letters)
>mm_chr6_22952626_22953721
Length = 1096
Score = 1317 bits (681), Expect = 0.0
Identities = 690/693 (99%)
Strand = Plus / Plus
Query: 4 ggaattccggtccaccagcagaccttcactttttaaccagaacgttcaaccatttgtagc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccggtccaccagcagaccttcactttttaaccagaacgttcaaccatttgtagc 263
Query: 64 tcctataaatataatttcactcatgatttcaaatgaatatccaacatatttttggtcctt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcctataaatataatttcactcatgatttcaaatgaatatccaacatatttttggtcctt 323
Query: 124 ggtttaattatcttcaaaatacattgtttgtgtgttgttactaattcctattctacagga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggtttaattatcttcaaaatacattgtttgtgtgttgttactaattcctattctacagga 383
Query: 184 ttcctattgtgtgtacaatcaattatatatgcataatacaccgttagtatattgcaatgc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttcctattgtgtgtacaatcaattatatatgcataatacaccgttagtatattgcaatgc 443
Query: 244 agtgtgctgtgttaagacaatttaaatgttcatacttgtattctaaaataagttgtaaac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agtgtgctgtgttaagacaatttaaatgttcatacttgtattctaaaataagttgtaaac 503
Query: 304 caattctattggatttaaaatctcagtaatatgctatgagcacctatccaccaacggaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 504 caattctattggatttaaaatctcagtaatatgctatgagcacctatccaccaacagaaa 563
Query: 364 caaaggagacacttcccatgtgcacatcaacgtggagagcttctaaaaaagaattacagg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 caaaggagacacttcccatgtgcacatcaacgtggagagcttctaaaaaagaattacagg 623
Query: 424 gctatgatttgatagctaaggaaggctttgaaaaacatcatattgcttttaaaactatct 483
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 624 gctatgatttgatagctaaggaaggttttgaaaaacatcatattgcttttaaaactatct 683
Query: 484 ttctttgagtttctttatgttgcctaaagagggcagtataaaccagcaaaatacattcta 543
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttctttgagcttctttatgttgcctaaagagggcagtataaaccagcaaaatacattcta 743
Query: 544 cttcgtgtttgttacagtatttgtcattccggcttaaataatagacatgaatatgcatag 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cttcgtgtttgttacagtatttgtcattccggcttaaataatagacatgaatatgcatag 803
Query: 604 tatgtataggtattgtgtgacaagatgtaaaaagaaagaaagaaaaaaaagaaaaaagcc 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tatgtataggtattgtgtgacaagatgtaaaaagaaagaaagaaaaaaaagaaaaaagcc 863
Query: 664 tagagccttttctgtagggatgcatttcattgt 696
|||||||||||||||||||||||||||||||||
Sbjct: 864 tagagccttttctgtagggatgcatttcattgt 896
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1096
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1086
Effective search space: 744996
Effective search space used: 744996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_a18.g1 MSMg01no451_a18.g1 CHROMAT_FILE:
MSMg01no451_a18.g1 PHD_FILE: MSMg01no451_a18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:10 2005
(591 letters)
>mm_chr6_22993841_22994831
Length = 991
Score = 735 bits (380), Expect = 0.0
Identities = 409/424 (96%), Gaps = 9/424 (2%)
Strand = Plus / Minus
Query: 1 attgctctggtaatagccctacagaagcaaagacatgagagaagagcccaacatatgact 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 424 attgctctggtaatagccctacagaagcaaagacatgagagaagagcccaacctatgact 365
Query: 61 aaacagagaaacgtggttttatattaaagtagtgtatttaattctagatcgtatgctgaa 120
||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 364 taacagagaaacatggttttatgttaaagtagtgtatttaattctagaccgtatgctgaa 305
Query: 121 agaatactgtattacaaccaacatttactggccagtgtctatatgctaggtatagttttc 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 304 agaatactgtattacaaccaaaatttactggccagtgtctatatgctaggtatagttttc 245
Query: 181 ttcctattcaggaatctatgagatagaactatcatcctca---------ttttttttttt 231
|||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 244 ttcctattcaggaatctatgagatagaactatcatcctcatttttttttttttttttttt 185
Query: 232 tttttgagacagggtttctctgtatagccctggctgtcctgctttcctgtaattcacttt 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tttttgagacagggtttctctgtatagccctggctgtcctgctttcctgtaattcacttt 125
Query: 292 gtagactaggctggccacgaactcagaaacctgccttcctctgcctcccgagtgctggga 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gtagactaggctggccacgaactcagaaacctgccttcctctgcctcccgagtgctggga 65
Query: 352 ttaaaggcgtgcaccaccatgcccggtttatcatcctcattttaaaggtggttaaactgg 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ttaaaggcgtgcaccaccatgcccggtttatcatcctcattttaaaggtggttaaactgg 5
Query: 412 gtat 415
||||
Sbjct: 4 gtat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space: 569961
Effective search space used: 569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
