Query= MSMg01no452_d05.b1 MSMg01no452_d05.b1 CHROMAT_FILE:
MSMg01no452_d05.b1 PHD_FILE: MSMg01no452_d05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:41 2005
(702 letters)
>mm_chr6_37088630_37089731
Length = 1102
Score = 1104 bits (571), Expect = 0.0
Identities = 576/578 (99%)
Strand = Plus / Minus
Query: 124 aggcaaaaaaggcataccatcattttcttgcatgattcaagtatggtgagtttccatgtg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1101 aggcaaaaaaggcataccatcattttcttgcatgattcaagtatggtgagtttccatgtg 1042
Query: 184 ttgtaatttatgacttcaagctaaaggatgtaacataacagtaattattgctttctgcct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 ttgtaatttatgacttcaagctaaaggatgtaacataacagtaattattgctttctgcct 982
Query: 244 ctcgtggtgggacatgacaaaatatgtgtttactcacttattctgtgacttttagtttgt 303
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 981 ctcgtggtgggacatgacaaaatatgtgtttactcacgtattctgtgacttttagtttgt 922
Query: 304 tttttatttttttaaaaaatgtattgatatttgctgattatcaggcagtaagtcagttgc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 tttttatttttttaaaaaatgtattgatatttgctgattatcaggcagtaagtcagttgc 862
Query: 364 tgtaaatttaatgtttttatgaatcttagaacctagtatgaaaggaaatgttaatcaaaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 tgtaaatttaatgtttttatgaatcttagaacctagtatgaaaggaaatgttaatcaaaa 802
Query: 424 aattatgccaatatgtgaataagtgcaagggaaggtaaataatgggaaagaaacatgaat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aattatgccaatatgtgaataagtgcaagggaaggtaaataatgggaaagaaacatgaat 742
Query: 484 ttatgacagaaactaacagaaaaacttaacatggatcatggggcattgagaactttttga 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttatgacagaaactaacagaaaaacttaacatggatcatggggcattgagaactttttga 682
Query: 544 ggaaataactcttgatttgatggtcacactacaaatagaaattagccatataaattaatc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggaaataactcttgatttgatggtcacactacaaatagaaattagccatataaattaatc 622
Query: 604 cagagacaggtaaagaaattggagaaagacaaaaaacatatagtgaacatttttgatggg 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagagacaggtaaagaaattggagaaagacaaaaaacatatagtgaacatttttgatggg 562
Query: 664 gatagttgagcaaagacctganggggtgagggacacac 701
||||||||||||||||||||| ||||||||||||||||
Sbjct: 561 gatagttgagcaaagacctgagggggtgagggacacac 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 702
Length of database: 1102
Length adjustment: 10
Effective length of query: 692
Effective length of database: 1092
Effective search space: 755664
Effective search space used: 755664
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no452_d05.g1 MSMg01no452_d05.g1 CHROMAT_FILE:
MSMg01no452_d05.g1 PHD_FILE: MSMg01no452_d05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:42 2005
(610 letters)
>mm_chr6_36939273_36940282
Length = 1010
Score = 1166 bits (603), Expect = 0.0
Identities = 609/611 (99%), Gaps = 1/611 (0%)
Strand = Plus / Plus
Query: 1 caggaggcatttgaatacagggtaacaagtgcagccatgaccctgaggacagtcagaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggaggcatttgaatacagggtaacaagtgcagccatgaccctgaggacagtcagaact 260
Query: 61 tgtggccatcatgtcaattgcctcctaatggggggaagtggggaagtaaaattctttaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtggccatcatgtcaattgcctcctaatggggggaagtggggaagtaaaattctttaag 320
Query: 121 gaaccagaacaaaaataaatgaaatgagcccaatatgagcataagggaggaagtaataaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaccagaacaaaaataaatgaaatgagcccaatatgagcataagggaggaagtaataaa 380
Query: 181 gggcaaagtttaactatatttcaaacagaaaacaatcaggaaagtcagtgtaaccaacag 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggcaaagttcaactatatttcaaacagaaaacaatcaggaaagtcagtgtaaccaacag 440
Query: 241 acaattttggggttgggcgataaaataactctgccaagactgatgaaaacttcaaaagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaattttggggttgggcgataaaataactctgccaagactgatgaaaacttcaaaagat 500
Query: 301 gcattgaattacaaatatcaagaataaaaaaaaa-gaactacgcctacagttgccacaga 359
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 501 gcattgaattacaaatatcaagaataaaaaaaaaagaactacgcctacagttgccacaga 560
Query: 360 aataaaagagataaagaagttttctttacaatcccatccatatcaattgccaacatagaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aataaaagagataaagaagttttctttacaatcccatccatatcaattgccaacatagaa 620
Query: 420 gaaatggacagattctatggaaatatcaaacaaccataaaaaattcaccaaggtaaagat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaaatggacagattctatggaaatatcaaacaaccataaaaaattcaccaaggtaaagat 680
Query: 480 aaatgacctgaatagtcctagagattctaaaataacttggtttaccactcaaggggttac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaatgacctgaatagtcctagagattctaaaataacttggtttaccactcaaggggttac 740
Query: 540 ttattatttatatcttctgagtataactacttggctgtatgcatgtatgcataccatgtg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttattatttatatcttctgagtataactacttggctgtatgcatgtatgcataccatgtg 800
Query: 600 cttgccttgtg 610
|||||||||||
Sbjct: 801 cttgccttgtg 811
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space: 600000
Effective search space used: 600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
