Query= MSMg01no452_m21.b1 MSMg01no452_m21.b1 CHROMAT_FILE:
MSMg01no452_m21.b1 PHD_FILE: MSMg01no452_m21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:29 2005
(652 letters)
>mm_chr6_99294216_99295267
Length = 1052
Score = 1239 bits (641), Expect = 0.0
Identities = 650/653 (99%), Gaps = 1/653 (0%)
Strand = Plus / Minus
Query: 1 ataaaactgagacacagagagtgcacagtttcagagaaagaaaatac-tagactcgtctg 59
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 817 ataaaactgagacacagagagtgcacagtttcagagaaagaaaatacatagactcgtctg 758
Query: 60 cttcatggacagaaaaccttccccatctccccagactgtgccttgaagggaatcatacca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 cttcatggacagaaaaccttccccatctccccagactgtgccttgaagggaatcatacca 698
Query: 120 gcataatgtcatagtgtccatgttgatgtttttaacagttttcatcaaggtgcctcaatt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 gcataatgtcatagtgtccatgttgatgtttttaacagttttcatcaaggtgcctcaatt 638
Query: 180 ttcattttcccctaggccccatcaattatgtagtctgcccgtccccatcataatatgctc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 ttcattttcccctaggccccatcaattatgtagtctgcccgtccccatcataatatgctc 578
Query: 240 tttctgtcatgtaaaatttttcagtgttattttccttaccagatttagggtcaccagaag 299
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tttcggtcatgtaaaatttttcagtgttattttccttaccagatttagggtcaccagaag 518
Query: 300 atacttgcctcaggcctgatgctccctgactatgccttctaaaagctgtatgtatttcat 359
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 517 atacttgcctcaggcctgatgctccctaactatgccttctaaaagctgtatgtatttcat 458
Query: 360 gcctggtaacaaccttgcccttataggatacaaatatatgaaagaagcctttggtgttga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gcctggtaacaaccttgcccttataggatacaaatatatgaaagaagcctttggtgttga 398
Query: 420 ttcagacttcttgaaccaagtcctggctctgccactgtgcaagctggctcaacttcctca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ttcagacttcttgaaccaagtcctggctctgccactgtgcaagctggctcaacttcctca 338
Query: 480 atccagtttcctctttacaaagtggactggataatgcatgtttatatattcaccttgaga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 atccagtttcctctttacaaagtggactggataatgcatgtttatatattcaccttgaga 278
Query: 540 ctgagaatccaaaaagaaagtgtagaactgattccttaggagcctggctgaggcctaagt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ctgagaatccaaaaagaaagtgtagaactgattccttaggagcctggctgaggcctaagt 218
Query: 600 actacctactgcaacgtattgttgtaattgtcctacaacacggttcatcgtac 652
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 actacctactgcaacgtattgttgtaattgtcctacaacacggttcatcgtac 165
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_m21.g1 MSMg01no452_m21.g1 CHROMAT_FILE:
MSMg01no452_m21.g1 PHD_FILE: MSMg01no452_m21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:29 2005
(656 letters)
>mm_chr6_99178070_99179125
Length = 1056
Score = 1245 bits (644), Expect = 0.0
Identities = 653/656 (99%)
Strand = Plus / Plus
Query: 1 tatacagggaggcatttgtgcatctataaagaaagaagagcaaaatttttagtcatttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatacagggaggcatttgtgcatctataaagaaagaagagcaaaatttttagtcatttta 260
Query: 61 tattgggaccacaagatcagacccctgcccccaatactttcagccttatcatggatactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tattgggaccacaagatcagacccctgcccccaatactttcagccttatcatggatactt 320
Query: 121 aatgtttggagacttgccctggactgaaaagctaaacagagatgatgttttttcaaaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgtttggagacttgccctggactgaaaagctaaacagagatgatgttttttcaaaaca 380
Query: 181 catcaattcccagggcccatgaaatatttatggtaaactgccaacaaatgtgaaattcct 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 catcaattcccagggcccatgaaatatttatggtaaattgccaacaaatgtgaaattcct 440
Query: 241 aattccaaagttcagtcaaatgaggatgagaaacgcaagacccagaaaaggctcgacact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aattccaaagttcagtcaaatgaggatgagaaacgcaagacccagaaaaggctcgacact 500
Query: 301 gggcctggagagccagggatggcaacatgcacaaggctgaagctgaggagccccagcaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggcctggagagccagggatggcaacatgcacaaggctgaagctgaggagccccagcaac 560
Query: 361 aaggcgaaatgaggatctgactggattccctaattgtcttggcagctgtccctcatccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaggcgaaatgaggatctgactggattccctaattgtcttggcagctgtccctcatccca 620
Query: 421 attgggcttttggactgcacaccgtactgatgggacagggatgttgcattcactcctgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attgggcttttggactgcacaccgtactgatgggacagggatgttgcattcactcctgtc 680
Query: 481 aaagccatcagctctggatttcaaagcaccaagctgctgatccagtagttatttctctgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaagccatcagctctggatttcaaagcaccaagctgctgatccagtagttatttctctgt 740
Query: 541 ggtgcagggggagaagcgggagccacagaaccggatgattgataactgtattttattcag 600
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 741 ggtgcagggggagaagcgggagccacagaaccgtatgattgataactgtattttattcag 800
Query: 601 aactccaaggactataaaaaacaaccctatcatttgttgagtgctcgctgtgagcg 656
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 801 aactccaaggactataaaaaacaaccctaccatttgttgagtgctcgctgtgagcg 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
