Query= MSMg01no453_p02.b1 MSMg01no453_p02.b1 CHROMAT_FILE:
MSMg01no453_p02.b1 PHD_FILE: MSMg01no453_p02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:58 2005
(543 letters)
>mm_chr6_65256394_65257336
Length = 943
Score = 982 bits (508), Expect = 0.0
Identities = 532/540 (98%), Gaps = 1/540 (0%)
Strand = Plus / Plus
Query: 5 gaattcaggaattt-tctaatagttttgactgtttatgcatcaaataatggtgcttccaa 63
|||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcaggaatatatataatagttttgactgtttatgcatcaaataatggtgcttccaa 263
Query: 64 tttcataaataaacagtaaaagaccagatatgtctgggtaaactctagtgactttagtag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttcataaataaacagtaaaagaccagatatgtctgggtaaactctagtgactttagtag 323
Query: 124 cttgctcttactgctaggtcttcaaactaaaaatctgaaaaaaaaattttcagagagaag 183
|||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 324 cttgctcttactattaggtcttcaaactaaaaatctgtaaaaaaaattttcagagagaag 383
Query: 184 ctttattccaaatcatttgcttttaacagatatctacagaatatttcatacaacagctag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctttattccaaatcatttgcttttaacagatatctacagaatatttcatacaacagctag 443
Query: 244 gaaataggccttcttttcagtgatccacagcacctccttcgaagtcaatcagattgtaag 303
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 444 gaaataggccttcttttcagtgatccacagcacctcctccgaagtcaatcagattgtaag 503
Query: 304 tcacaaagaaaccttagcaaagagagttactctttggatttttattagagtctagtaaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcacaaagaaaccttagcaaagagagttactctttggatttttattagagtctagtaaaa 563
Query: 364 taaaatgagaggaagtaggaacacactggactatacaaatacttggagaaatcaaaagtg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 taaaatgagaggaagtaggaacacactggactatacaaatacttggagaaatcaaaagtg 623
Query: 424 ggccattagaagaaccagtgaaaagattaaagatgtctagactcaggtgacattcaggca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ggccattagaagaaccagtgaaaagattaaagatgtctagactcaggtgacattcaggca 683
Query: 484 caaatcaaagctttcatatccaatgaacagagtcctagaaatgaaggctgttgctgtcaa 543
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 684 caaatcaaagctttcatatccaatgaacagagtcctagaaataaaggctgttgctgtcaa 743
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space: 497289
Effective search space used: 497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_p02.g1 MSMg01no453_p02.g1 CHROMAT_FILE:
MSMg01no453_p02.g1 PHD_FILE: MSMg01no453_p02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:58 2005
(226 letters)
>mm_chr6_65391272_65391897
Length = 626
Score = 304 bits (157), Expect = 3e-87
Identities = 163/165 (98%)
Strand = Plus / Minus
Query: 4 agtgaggactctaacttcaaaggcagattaatccattgataaaattgaggtgagttgtct 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 agtgaggactctaacttcaaaggcagattaatccattgataaaattgaggtgagttgtct 309
Query: 64 attgggaggtgggtttggatggaaggcataggtcaccagacatcattacccctacaccac 123
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 308 attgggaggtgggtttggatggaaggcataggtcaccagacatcattatccctacaccac 249
Query: 124 tgctttctgtcctcttgtctgacatgaggtaaggaccctgctctg 168
|||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 248 tgctttctatcctcttgtctgacatgaggtaaggaccctgctctg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 226
Length of database: 626
Length adjustment: 9
Effective length of query: 217
Effective length of database: 617
Effective search space: 133889
Effective search space used: 133889
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
