Query= MSMg01no454_n24.b1 MSMg01no454_n24.b1 CHROMAT_FILE:
MSMg01no454_n24.b1 PHD_FILE: MSMg01no454_n24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:12 2005
(355 letters)
>mm_chr6_32309462_32310216
Length = 755
Score = 538 bits (278), Expect = e-157
Identities = 319/352 (90%), Gaps = 32/352 (9%)
Strand = Plus / Minus
Query: 4 ggaattcatcaaatttcctgtccccaaagtcctttccaaatgtgataaagtacatgtagg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 ggaattcatcaaatttcctgtccccaaagtcctttccaaatgtgataaagtacatgtagg 651
Query: 64 ggtgtgaatgagatgcccagaggcagggcagatcctttcaccactaccactcgtgtgtaa 123
||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 650 ggtgtgaatgagatgcccagaggcagggcagatcctt---cc---accactcgtgtgtaa 597
Query: 124 gctcatgagtgcacacacacacacacacacacacacacacacacacacacacacacacac 183
||||||||||| |||||||||||||||||||||||
Sbjct: 596 gctcatgagtg--------------------------cacacacacacacacacacacac 563
Query: 184 acacacagtgcaattcctgaccctacccacctcagttgccctccctgcaatcctctacac 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 562 acacacagtgcaattcctgaccctacccacctcagttgccctccctgcaatcctctgcac 503
Query: 244 atgccaggcagcacagggcaccatcccctcatcccatgttttggctggattgggtttctt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 atgccaggcagcacagggcaccatcccctcatcccatgttttggctggattgggtttctt 443
Query: 304 tcccctttctccctaagtgctgtgggggcgttaccactcctctctatttcag 355
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tcccctttctccctaagtgctgtgggggcgttaccactcctctctatttcag 391
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 755
Length adjustment: 9
Effective length of query: 346
Effective length of database: 746
Effective search space: 258116
Effective search space used: 258116
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no454_n24.g1 MSMg01no454_n24.g1 CHROMAT_FILE:
MSMg01no454_n24.g1 PHD_FILE: MSMg01no454_n24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:13 2005
(319 letters)
>mm_chr6_32130869_32131584
Length = 716
Score = 540 bits (279), Expect = e-158
Identities = 308/319 (96%), Gaps = 3/319 (0%)
Strand = Plus / Plus
Query: 1 tttacatgctctgtaagtctgtcacctgacactagctggacatgatcttttggcttgagg 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 tttacatgctctgtaagtctgtcacctgacactagctggacacgatcttttggcttgagg 260
Query: 61 aacaaaggctgctgcaatctggggacagagtatgatggtgcttataactgattgtgttgc 120
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 aacaaaggctgctgcaatttggggacagagtatgatggtgcttataaccgattgtgttgc 320
Query: 121 aaggggatggcagagggtggaaccagaaacatttaaatgtatttctctttcactaagaaa 180
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaggggacggcagagggtggaaccagaaacatttaaatgtatttctctttcactaagaag 380
Query: 181 tccattcaagcctctatttctggcagggtgtcttccatctttgccatttttattgtagtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccattcaagcctctatttctggcagggtgtcttccatctttgccatttttattgtagtc 440
Query: 241 tgtgactttttcctatgacctagaaaatgagagggcccagaggcctaagaggctgtacct 300
||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 441 tgtgacttttttctatgacctagaaaatgagagggaccagaggcctaagagg---tacct 497
Query: 301 ttgggttgtccagtagtca 319
||||||| |||||||||||
Sbjct: 498 ttgggttctccagtagtca 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 716
Length adjustment: 9
Effective length of query: 310
Effective length of database: 707
Effective search space: 219170
Effective search space used: 219170
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
