MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-454P14
Chromosome	6 (Build37)
Map Location	143,397,895 - 143,398,378
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Gys2, Ldhb, Kcnj8, Abcc9, 5330439B14Rik, Cmas, Gm766, EG665037, St8sia1, LOC665056, 5730419I09Rik, Etnk1, D6Ertd474e
Downstream gene	Sox5
Link	Open Mouse BAC browser

Click to get alignment info.

name	Gys2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232493 MGI:2385254
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ldhb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16832 MGI:96763
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcnj8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16523 MGI:1100508
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abcc9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20928 MGI:1352630
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 4 mRNAs

name	5330439B14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:321015 MGI:2447824
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cmas (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12764 MGI:1337124
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm766 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330440 MGI:2685612
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665037 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665037 MGI:3648132
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	St8sia1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20449 MGI:106011
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665056 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665056
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 33 ESTs, 6 Proteins pseudo : _no_value

name	5730419I09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74741 MGI:1921991
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Etnk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75320 MGI:1922570
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 477 ESTs, 6 Proteins

name	D6Ertd474e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52285 MGI:1196315
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sox5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20678 MGI:98367
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gys2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21704149 GeneID:232493 MGI:2385254
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycogen synthase 2 transcript_id : NM_145572.1

name	Ldhb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982224 GeneID:16832 MGI:96763
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lactate dehydrogenase B transcript_id : NM_008492.2

name	Kcnj8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802584 GeneID:16523 MGI:1100508
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium inwardly-rectifying channel, subfamily J, member 8 transcript_id : NM_008428.3

name	Abcc9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113722104 GeneID:20928 MGI:1352630
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family C (CFTR/MRP), member 9 transcript_id : NM_021042.2

name	Abcc9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113722107 GeneID:20928 MGI:1352630
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family C (CFTR/MRP), member 9 transcript_id : NM_001044720.1

name	Abcc9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113722103 GeneID:20928 MGI:1352630
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family C (CFTR/MRP), member 9 transcript_id : NM_011511.2

name	Abcc9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113722106 GeneID:20928 MGI:1352630
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family C (CFTR/MRP), member 9 transcript_id : NM_021041.2

name	5330439B14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351790 GeneID:321015 MGI:2447824
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5330439B14 gene transcript_id : NM_177314.3

name	Cmas (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22208853 GeneID:12764 MGI:1337124
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytidine monophospho-N-acetylneuraminic acid synthetase transcript_id : NM_009908.1

name	Gm766 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386702 GeneID:330440 MGI:2685612
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 766, (NCBI) transcript_id : NM_001033417.2

name	EG665037 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94378329 GeneID:665037 MGI:3648132
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG665037 transcript_id : XM_974103.1

name	St8sia1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70980542 GeneID:20449 MGI:106011
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 transcript_id : NM_011374.2

name	5730419I09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:30794171 GeneID:74741 MGI:1921991
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5730419I09 gene transcript_id : NM_029081.1

name	Etnk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149256021 GeneID:75320 MGI:1922570
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 477 ESTs, 6 Proteins product : ethanolamine kinase 1 transcript_id : XM_908334.3

name	Sox5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755607 GeneID:20678 MGI:98367
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SRY-box containing gene 5 transcript_id : NM_011444.1

name	Gys2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704150 CCDS:CCDS20683.1 GeneID:232493 MGI:2385254
definition	codon_start : 1 exception : mismatches in translation product : glycogen synthase 2 protein_id : NP_663547.1

name	Ldhb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678674 CCDS:CCDS20684.1 GeneID:16832 MGI:96763
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0004459 - L-lactate dehydrogenase activity [Evidence IDA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0019642 - anaerobic glycolysis [Evidence IEA]; GO:0006096 - glycolysis [Evidence IEA]; GO:0006100 - tricarboxylic acid cycle intermediate metabolism [Evidence IEA] codon_start : 1 note : lactate dehydrogenase-B product : lactate dehydrogenase 2, B chain protein_id : NP_032518.1

name	Kcnj8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680534 CCDS:CCDS20685.1 GeneID:16523 MGI:1100508
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0030016 - myofibril [Evidence IDA] GO_function : GO:0005242 - inward rectifier potassium channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : potassium inwardly-rectifying channel J8 protein_id : NP_032454.1

name	Abcc9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755696 GeneID:20928 MGI:1352630
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0030017 - sarcomere [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0008281 - sulfonylurea receptor activity [Evidence IEA] GO_process : GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; sulfonylurea-binding protein 2; sulfonylurea receptor 2 product : ATP-binding cassette, sub-family C, member 9 isoform a protein_id : NP_035641.1

name	Abcc9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113722105 GeneID:20928 MGI:1352630
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0030017 - sarcomere [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0008281 - sulfonylurea receptor activity [Evidence IEA] GO_process : GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform c is encoded by transcript variant 4; sulfonylurea-binding protein 2; sulfonylurea receptor 2 product : ATP-binding cassette, sub-family C, member 9 isoform c protein_id : NP_066379.2

name	Abcc9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113722108 GeneID:20928 MGI:1352630
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0030017 - sarcomere [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0008281 - sulfonylurea receptor activity [Evidence IEA] GO_process : GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform d is encoded by transcript variant 5; sulfonylurea-binding protein 2; sulfonylurea receptor 2 product : ATP-binding cassette, sub-family C, member 9 isoform d protein_id : NP_001038185.1

name	Abcc9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11038664 GeneID:20928 MGI:1352630
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0030017 - sarcomere [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0008281 - sulfonylurea receptor activity [Evidence IEA] GO_process : GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; sulfonylurea-binding protein 2; sulfonylurea receptor 2 product : ATP-binding cassette, sub-family C, member 9 isoform b protein_id : NP_066378.1

name	5330439B14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893427 GeneID:321015 MGI:2447824
definition	codon_start : 1 product : hypothetical protein LOC321015 protein_id : NP_796288.1

name	Cmas (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22208854 CCDS:CCDS20687.1 GeneID:12764 MGI:1337124
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0008781 - N-acylneuraminate cytidylyltransferase activity [Evidence ISS] [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006055 - CMP-N-acetylneuraminate biosynthesis [Evidence ISS]; GO:0009103 - lipopolysaccharide biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : CMP-Neu5Ac synthase; CMP-sialic acid synthetase product : cytidine monophospho-N-acetylneuraminic acid synthetase protein_id : NP_034038.1

name	Gm766 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701919 GeneID:330440 MGI:2685612
definition	GO_function : GO:0008146 - sulfotransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC330440 protein_id : NP_001028589.1

name	EG665037 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94378330 GeneID:665037 MGI:3648132
definition	codon_start : 1 product : hypothetical protein protein_id : XP_979197.1

name	St8sia1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70980543 CCDS:CCDS20689.1 GeneID:20449 MGI:106011
definition	GO_component : GO:0030173 - integral to Golgi membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003828 - alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity [Evidence IEA]; GO:0008373 - sialyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0008284 - positive regulation of cell proliferation [Evidence IDA]; GO:0006486 - protein amino acid glycosylation [Evidence IEA] codon_start : 1 note : alpha-2, 8-sialyltransferase; ST8Sia I; GD3 synthase; alpha-2,8-sialyltransferase; sialyltransferase 8 A product : ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 protein_id : NP_035504.2

name	5730419I09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794172 GeneID:74741 MGI:1921991
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0008021 - synaptic vesicle [Evidence IEA] GO_function : GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC74741 protein_id : NP_083357.1

name	Etnk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149256022 GeneID:75320 MGI:1922570
definition	codon_start : 1 product : ethanolamine kinase 1 protein_id : XP_913427.3

name	Sox5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755608 GeneID:20678 MGI:98367
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0051216 - cartilage development [Evidence IGI]; GO:0045165 - cell fate commitment [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : SRY (sex determining region Y)-box 5 protein_id : NP_035574.1

name	(CDS detail)
type	STS
link
xref	UniSTS:179489
definition	standard_name : AI790582

name	(CDS detail)
type	STS
link
xref	UniSTS:224332
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:130962
definition	standard_name : D6Mit60

name	(CDS detail)
type	STS
link
xref	UniSTS:159584
definition	standard_name : D88159

name	(CDS detail)
type	STS
link
xref	UniSTS:179491
definition	standard_name : AI448900

name	(CDS detail)
type	STS
link
xref	UniSTS:159586
definition	standard_name : AI414027

name	(CDS detail)
type	STS
link
xref	UniSTS:179485
definition	standard_name : AI449286

name	(CDS detail)
type	STS
link
xref	UniSTS:116330
definition	standard_name : D6Mit259

name	(CDS detail)
type	STS
link
xref	UniSTS:179492
definition	standard_name : AJ006215

name	(CDS detail)
type	STS
link
xref	UniSTS:141354
definition	standard_name : Cmas

name	(CDS detail)
type	STS
link
xref	UniSTS:179490
definition	standard_name : AW208911

name	(CDS detail)
type	STS
link
xref	UniSTS:208047
definition	standard_name : BE687166

name	(CDS detail)
type	STS
link
xref	UniSTS:144405
definition	standard_name : Siat8a

name	(CDS detail)
type	STS
link
xref	UniSTS:208046
definition	standard_name : BB234544

name	(CDS detail)
type	STS
link
xref	UniSTS:164343
definition	standard_name : AI841245

name	(CDS detail)
type	STS
link
xref	UniSTS:232595
definition	standard_name : RH143348

name	(CDS detail)
type	STS
link
xref	UniSTS:162659
definition	standard_name : RH125947

name	(CDS detail)
type	STS
link
xref	UniSTS:208048
definition	standard_name : BB377319

name	(CDS detail)
type	STS
link
xref	UniSTS:208049
definition	standard_name : RH126992

name	(CDS detail)
type	STS
link
xref	UniSTS:209939
definition	standard_name : RH135943

name	(CDS detail)
type	STS
link
xref	UniSTS:235573
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:167491
definition	standard_name : C87001

name	(CDS detail)
type	STS
link
xref	UniSTS:235572
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:179493
definition	standard_name : AU023129

name	(CDS detail)
type	STS
link
xref	UniSTS:130656
definition	standard_name : D6Mit113

name	(CDS detail)
type	STS
link
xref	UniSTS:163404
definition	standard_name : AJ010604

name	(CDS detail)
type	STS
link
xref	UniSTS:217990
definition	standard_name : RH134712

name	(CDS detail)
type	STS
link
xref	UniSTS:144489
definition	standard_name : Sox5

name	(CDS detail)
type	STS
link
xref	UniSTS:179494
definition	standard_name : AI528773

name	(CDS detail)
type	STS
link
xref	UniSTS:225315
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:142582
definition	standard_name : D6Jpk3

name	(CDS detail)
type	STS
link
xref	UniSTS:186274
definition	standard_name : M-10797

name	LOC665056 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149256020 GeneID:665056
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 33 ESTs, 6 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_030783.1

name	D6Ertd474e (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149256015 GeneID:52285 MGI:1196315
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 6, ERATO Doi 474, expressed transcript_id : XR_035149.1

clone name	MSMg01-141O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105M07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-301D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279P21
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-454P14.T7 (MSMg01no454_p14.b1)	MSMg01-454P14.TJ (MSMg01no454_p14.g1)
ACC	AG541623	AG541624
length	773	1,339
length of high quality (start - end)	489 (47 - 535)	---
definition	CHROMAT_FILE: MSMg01no454_p14.b1 PHD_FILE: MSMg01no454_p14.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:26:20 2005	CHROMAT_FILE: MSMg01no454_p14.g1 PHD_FILE: MSMg01no454_p14.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:26:20 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAGAATCCGCGGA ATTCTGCCTTTCTCCCTCTCTCCCCCCGCTCCCCTCCTCTTTCCCTCTGC CCCCTCCCTCTCTACAGAACAGAAAAGAGACCATCAACACCACATGAAGG AGTCTCCTCAGGCTGAGATTGGACCTTCTCTCCAGACATAGAGAGGGATG TAGCCCCTCCTGCCCTTCTAGCCTTGTGGACATTTCCCAGCCTCTAGATG AACAAATGTCTCGGGAACATTGAATAATATGCTTCATCTTTTTATACATG CATGCGTGCATGCATGTCTTCTCTTCCATCCATCCAGCATGGTAAATTCG AGAGCCCACATCAGTAGCTGAATATTTCAAGGACTGTTACTGCCTGTTGC CTGACTCAATCCACAGCCGGAGGAAAGGAGAGGGTTCTTGGAGGCTGGCG GTGAGCACAAGAATTTAGGAATCTTTGAGAAGGGTTACTCAAGGCAGAGG AGGGTGGGTAAAGAGGAAAACGGAATTGGAAAGAGTGCCCACACCAGCTT CTCAGTGCAGCTATTGCAGTCAGGTGGGAAAAAAACACACCTACTTTTTT TATAACCTGAAAACCCCTTCGCTAGAGTTGGGAGACTCCCTCATCTTAAT TCTGCCCGAAAGGTTTCTGGAAGTCTTTCCGGGGTCTACTTAGGGAAACC CCTTTAAAATTTAATTTTTCCGACAGAAAAGCCCCGGGGTTTTTATCAAT AAATTAAAGGGGGGCGCGGAGGN	TGCCGCTCCCCGTAACAGTTATCCAGCGGGATGTGACGACGTCTCCCCTC CAAGACACGCAGGGGGNAGAGATATCCAACTATTTTATTCTCCCCTCCGT AGAGACGTATCAGGTAAGGTATATATAGTACGTCATTTCCCGCTCTACAC CTTCTCGATATATACTCCCTTCACCCACCCCTCCGATCTGTATGTATCCC CTCTCACCTCTCCGCTACAGCACTAATTTAGCTACGCTACTACCCGGCCC GGGCGCGTGTGTGTAGGGGGTGCGGCGGTCGCCGCGGCACGCGGAGCCGC CCGTTATGGGTATATCTACGTATCTCGCCCCGCATACTCCATCTCCGCTC ACTCATCTACCCGCCNCTGCACGTCCANACAGACTACTANGTGATATAAC GAAACAGGCGGAGAGACGCTCACTGTGAGGAATCGAGCAGTGAGATTGTA GGTATATGGCACCAGTTCCTTGTTTTTGTTTATCCATGCCCGACCTCGTC GTAGAAATAATTTTTCACGGGTCTGCTGTTAAATTAATAAAACAGATAAA CTACGGGCCGGCGTCGAGAGCTGGGTCTTACGCGCGCGTTGTGGAGCGGA TTCGCGCCGTATCCTCTATGTCGGTCGTTCGCATATTGCGGTTTCGCGGG TGCGCGTTTTCTTGCCGCGGGCTTTGCGGCTTTCCGTCGCGAGTGACGAC TATTTTTTATACCGTGGTCTACAACGCACGCTGCTGCGCCTAATATGATT TAATTATGAGCGCCCCTGATCCGTAGTTCATTAATATATATAACAGATGG TACGTACNATGGAGATAAAGAACACTGTACTCCATATCACGCCAAAGGCG GTATATAAACGTAGTAATTAACAATAAGCCCCATTCTCGCCCTGCTGTAT TTACTTCGCGACACATCGTATCTCAGGAATATCGAAGACGACGCCGGTTA CATCATTTATTTCTTTCNCGCCTTATCCGCGTAGATTCTCTGAAGCGCCG CGCAGTTATACTATTATCACCAGTATTGTGTCGGCGAAGCCATACATGGT CACACACCATAGTACTCGCGATAAGCTGCGGGCGGTGAGTGTCGTCGCGC GCACGTTTAACCGCGATATAGCGCCTTCATCCGATCTTATTATACGGCCC GGTCGGCGCCGCTTGTTGATCCCAGATATTGGTCATAGATTTATACCCGC CCGCGCGCGATTTGCTACATTGTACGTGAGTACACATTATGCACATCTCG TACATCACGTATCATCCATATCTATATTTGTTTATCGCCGCCCCCACNAC ACACCATATATACCGCGTGCTGTGAATCTCATCGACTAG
quality values	Open. Hide. 9 9 9 9 11 14 19 34 24 21 21 24 21 29 37 37 22 19 17 25 30 30 47 47 28 28 24 20 20 21 19 10 10 14 8 9 9 10 9 8 8 8 8 8 13 12 25 26 30 30 28 28 31 31 41 41 39 39 27 18 9 9 10 15 17 18 35 36 36 35 35 37 37 43 48 43 48 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 47 47 47 42 57 41 47 44 44 57 59 59 68 68 57 57 57 47 50 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 50 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 47 46 57 57 44 44 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 57 57 57 57 57 57 59 59 59 59 59 59 53 50 50 50 50 47 36 28 10 11 8 8 8 8 8 8 8 8 8 23 28 59 47 50 50 50 50 53 53 57 57 57 59 59 59 59 59 57 57 57 57 57 57 59 59 57 68 68 68 68 57 59 59 59 48 46 43 43 43 59 59 57 59 57 57 57 68 68 68 68 68 68 68 57 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 57 57 57 57 57 57 57 57 57 57 57 54 57 57 57 57 57 57 54 54 54 57 48 48 54 54 54 54 57 68 68 68 59 59 54 57 48 59 59 57 57 57 57 57 57 48 48 48 59 59 59 59 59 59 48 48 50 48 47 41 41 41 41 41 37 32 29 29 27 32 35 36 31 31 30 37 37 37 39 37 37 39 37 37 35 31 31 31 31 31 39 37 37 30 30 32 31 31 35 28 30 14 15 15 31 22 25 31 32 31 36 34 41 32 32 34 37 37 12 11 11 11 11 10 18 21 24 26 25 29 25 27 27 26 26 31 25 26 17 14 14 15 18 11 13 11 11 11 15 15 20 28 27 18 22 19 15 16 15 13 11 12 12 20 23 11 21 14 16 11 11 11 11 11 11 11 8 6 6 6 10 8 18 22 19 17 8 8 8 8 10 10 10 9 10 9 11 11 18 20 19 17 17 10 8 10 12 13 12 15 14 20 20 19 10 8 6 6 6 7 10 10 9 10 10 10 10 8 8 8 8 8 8 8 10 10 10 10 10 11 10 10 7 7 6 6 8 8 9 9 9 9 9 10 8 8 8 8 8 8 9 9 10 11 10 10 10 13 19 15 12 14 15 9 8 8 8 8 8 9 11 10 11 11 10 12 14 11 11 9 9 9 8 10 8 8 8 9 23 17 16 11 11 10 10 9 9 9 9 10 10 10 10 12 12 9 9 9 9 19 13 11 10 8 8 8 6 6 8 10 13 14 14 9 9 9 10 12 10 12 12 12 16 12 9 9 6 6 6 6 6 6 8 8 8 12 10 8 8 8 12 10 10 9 9 8 8 8 8 8 8 8 8 8 8 3 0	Open. 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Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no454_p14.b1 MSMg01no454_p14.b1 CHROMAT_FILE:
MSMg01no454_p14.b1 PHD_FILE: MSMg01no454_p14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:20 2005
         (489 letters)



>mm_chr6_143397692_143398578
          Length = 887

 Score =  857 bits (443), Expect = 0.0
 Identities = 476/487 (97%), Gaps = 3/487 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   gaattctgcctttctccctctctccccccgctcccctcctctttccctctgccccctccc 62
           ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 204 gaattctgcctttctccctctcttccccc-ctcccctcctctttccctctgccccctccc 262

                                                                       
Query: 63  tctctacagaacagaaaagagaccatcaacaccacatgaaggagtctcctcaggctgaga 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tctctacagaacagaaaagagaccatcaacaccacatgaaggagtctcctcaggctgaga 322

                                                                       
Query: 123 ttggaccttctctccagacatagagagggatgtagcccctcctgcccttctagccttgtg 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttggaccttctctccagacatagagagggatgtagcccctcctgcccttctagccttgtg 382

                                                                       
Query: 183 gacatttcccagcctctagatgaacaaatgtctcgggaacattgaataatatgcttcatc 242
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 383 gacatttcccagcctctagatgaacaaatgtctcaggaacattgaataatatgcttcatc 442

                                                                       
Query: 243 tttttatacatgcatgcgtgcatgcatgtcttctcttccatccatccagcatggtaaatt 302
           |||||||||||||||||||||||||||| |  | | ||||||||||||||||||||||||
Sbjct: 443 tttttatacatgcatgcgtgcatgcatg-cacc-catccatccatccagcatggtaaatt 500

                                                                       
Query: 303 cgagagcccacatcagtagctgaatatttcaaggactgttactgcctgttgcctgactca 362
           ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||
Sbjct: 501 cgagagcccacatcagtagctgaatatttcaaggactgttaccacctgttgcctgactca 560

                                                                       
Query: 363 atccacagccggaggaaaggagagggttcttggaggctggcggtgagcacaagaatttag 422
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 561 atccacagccggaggaaaggagagggttcttggaggctggcagtgagcacaagaatttag 620

                                                                       
Query: 423 gaatctttgagaagggttactcaaggcagaggagggtgggtaaagaggaaaacggaattg 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaatctttgagaagggttactcaaggcagaggagggtgggtaaagaggaaaacggaattg 680

                  
Query: 483 gaaagag 489
           |||||||
Sbjct: 681 gaaagag 687


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 887
Length adjustment: 10
Effective length of query: 479
Effective length of database: 877
Effective search space:   420083
Effective search space used:   420083
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information