Query= MSMg01no455_a10.b1 MSMg01no455_a10.b1 CHROMAT_FILE:
MSMg01no455_a10.b1 PHD_FILE: MSMg01no455_a10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:25 2005
(603 letters)
>mm_chr6_20158070_20159073
Length = 1004
Score = 1145 bits (592), Expect = 0.0
Identities = 601/604 (99%), Gaps = 1/604 (0%)
Strand = Plus / Minus
Query: 1 caatagaagttctccttcattgaattaagccaataatattttatcatttaaattttccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 caatagaagttctccttcattgaattaagccaataatattttatcatttaaattttccac 745
Query: 61 acatccattcttcatacttttgatcatttaaatatagtgttaatgagaaaaataaataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 acatccattcttcatacttttgatcatttaaatatagtgttaatgagaaaaataaataaa 685
Query: 121 tgaaacaatg-tttttttttaagagcaaggcgtttttaaacttacttttagaaatttgaa 179
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgaaacaatgttttttttttaagagcaaggcgtttttaaacttacttttagaaatttgaa 625
Query: 180 tttattctgactttgtgccaatgttaagttcagaattgagtgaagtatctttagaaggat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tttattctgactttgtgccaatgttaagttcagaattgagtgaagtatctttagaaggat 565
Query: 240 acttatatgagggtcagtatctcattcagtgataaagccgtaattctgaggtgaccatgg 299
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 acttacatgagggtcagtatctcattcagtgataaagccgtaattctgaggtgaccatgg 505
Query: 300 gaaccagacttgggttctgtgtaggagccatctactctcgtaaacactggattccagctc 359
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 504 gaaccagacttgggttctgtgtaggagccatctactctcgtgaacactggattccagctc 445
Query: 360 ctactccagtattttcttacaggagcttcagaaagattttgagtagctactatttataag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctactccagtattttcttacaggagcttcagaaagattttgagtagctactatttataag 385
Query: 420 acacttgtaaaatgaatgaggtatggttgataactctaaaatcatatcatttaaactagt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acacttgtaaaatgaatgaggtatggttgataactctaaaatcatatcatttaaactagt 325
Query: 480 tttaaattttaatggaataatcgttcaaattacttacaatcctgcttatttcagatgcat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttaaattttaatggaataatcgttcaaattacttacaatcctgcttatttcagatgcat 265
Query: 540 atagatggataattaatattattggttggtggttaatactaaatcactaatagtattgac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atagatggataattaatattattggttggtggttaatactaaatcactaatagtattgac 205
Query: 600 agtt 603
||||
Sbjct: 204 agtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1004
Length adjustment: 10
Effective length of query: 593
Effective length of database: 994
Effective search space: 589442
Effective search space used: 589442
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_a10.g1 MSMg01no455_a10.g1 CHROMAT_FILE:
MSMg01no455_a10.g1 PHD_FILE: MSMg01no455_a10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:25 2005
(530 letters)
>mm_chr6_20027632_20028561
Length = 930
Score = 986 bits (510), Expect = 0.0
Identities = 525/530 (99%)
Strand = Plus / Plus
Query: 1 catgatatatggaggacagagccattaccttgatattatcaattgaatatgtttaacttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 catgatatatggaggacagagccattaccttgatattatcaattgaatatgtttaacctt 260
Query: 61 ttttgacatctaaatcacataatcaatatagctaacatgttacaattaaaatcactcatt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 ttttgacatctaaatcacataatcaatatagctaacatgttacaattaaaatcattcatt 320
Query: 121 attactcagagaaaagttaaattatatcttgcttaattctcttattttgcagttcataaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attactcagagaaaagttaaattatatcttgcttaattctcttattttgcagttcataaa 380
Query: 181 gttatctttagtaaaatactaagtaaattatttcataaacatcaactattaaacaagttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttatctttagtaaaatactaagtaaattatttcataaacatcaactattaaacaagttg 440
Query: 241 tttagctatttttcaaatttcaaatatttggagagttctcctttgcaatgttgttccatg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttagctatttttcaaatttcaaatatttggagagttctcctttgcaatgttgttccatg 500
Query: 301 gtttgtttagtttatcaggtgattactgggttttccttataagataagaaatggaaaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtttgtttagtttatcaggtgattactgggttttccttataagataagaaatggaaaaaa 560
Query: 361 ttattgccttgaattaaaggaatctgtttttttttaatgtttaccctcatctctactgat 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttattgtcttgaattaaaggaatctgtttttttttaatgtttaccctcatctctactgat 620
Query: 421 gaatatacttgctatagctttctttcaattttataaaaagtttagaacatctgtgagtat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaatatacttgctatagctttctttcaattttataaaaagtttagaacatctgtgagtat 680
Query: 481 agatgagttgcaagtacactgagaatatttaaagaatttcataggtacct 530
|||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 681 agatgagttgcaagcacactgagaatatttaaagaatttcataggtacct 730
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space: 478400
Effective search space used: 478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
