Query= MSMg01no456_m09.b1 MSMg01no456_m09.b1 CHROMAT_FILE:
MSMg01no456_m09.b1 PHD_FILE: MSMg01no456_m09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:42 2005
(189 letters)
>mm_chr6_75436046_75436634
Length = 589
Score = 366 bits (189), Expect = e-106
Identities = 189/189 (100%)
Strand = Plus / Plus
Query: 1 gttcatgtgtttggttccacttagaaaatgttcactggccatgagttatttgaatttcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttcatgtgtttggttccacttagaaaatgttcactggccatgagttatttgaatttcat 260
Query: 61 agttggaattggtttgagtacctcatgactatctgctgtagtcttattctcaaatataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agttggaattggtttgagtacctcatgactatctgctgtagtcttattctcaaatataaa 320
Query: 121 tctctgttgaaattaaaaactagcattatcagaaggctaggtttggtgaaaatatgatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctctgttgaaattaaaaactagcattatcagaaggctaggtttggtgaaaatatgatgg 380
Query: 181 ctaacaaag 189
|||||||||
Sbjct: 381 ctaacaaag 389
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 589
Length adjustment: 8
Effective length of query: 181
Effective length of database: 581
Effective search space: 105161
Effective search space used: 105161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no456_m09.g1 MSMg01no456_m09.g1 CHROMAT_FILE:
MSMg01no456_m09.g1 PHD_FILE: MSMg01no456_m09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:42 2005
(197 letters)
>mm_chr6_75615132_75615729
Length = 598
Score = 340 bits (176), Expect = 3e-98
Identities = 191/196 (97%), Gaps = 1/196 (0%)
Strand = Plus / Minus
Query: 1 tgttcttctcttaattatttcatctataatttcataaggtattggaggacgctcatgggc 60
||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |
Sbjct: 396 tgttcttctcttaattatttcatatataatttcataaggtattggaggatgctcatggcc 337
Query: 61 attcctcttgtaattttaatgggatgcttgagaaaagataaataaatttggctctaa-tt 119
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 336 attcctcttgtaattttaatgggatgtttgagaaaagataaataaatttggctctaattt 277
Query: 120 tttcttgctccctttcaataactttatttgtcgaaataaaaatgacagagcttcttattt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tttcttgctccctttcaataactttatttgtcgaaataaaaatgacagagcttcttattt 217
Query: 180 tagtagagattgatta 195
||||||||||||||||
Sbjct: 216 tagtagagattgatta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 197
Length of database: 598
Length adjustment: 8
Effective length of query: 189
Effective length of database: 590
Effective search space: 111510
Effective search space used: 111510
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
