Query= MSMg01no457_g24.b1 MSMg01no457_g24.b1 CHROMAT_FILE:
MSMg01no457_g24.b1 PHD_FILE: MSMg01no457_g24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:38 2005
(450 letters)
>mm_chr6_27576309_27577161
Length = 853
Score = 812 bits (420), Expect = 0.0
Identities = 444/454 (97%), Gaps = 5/454 (1%)
Strand = Plus / Plus
Query: 1 aaggaacatggggagagaaacatgagacataggaatgtctgctgagcactaaggttcaca 60
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggaacattgg-agagaaacatgagacataggaatgtctgctgagcactaaggttcaca 259
Query: 61 taaggggtgcaagaccacacaccacagagggataaaaactcgatccctaagcttccgcag 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 260 taaggggtgcaagaccacacaccacagagggataaaaactcgatccctaagcttcctcag 319
Query: 121 aaaaacaagctgacgaatgaacgtgagcactcagctctgagagaagcaccaacagtca-- 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaaaacaagctgacgaatgaacgtgagcactcagctctgagagaagcaccaacagtcagt 379
Query: 179 --ccatgaagtatggccttccggaaactcgctaagcctgggccttaggctggcaaagctg 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caccatgaagtatggccttccggaaactcgctaagcctgggccttaggctggcaaagctg 439
Query: 237 ttcttcaactacgacctgtgcttgggttgtcccttctttcagccttgtctgttactactg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttcttcaactacgacctgtgcttgggttgtcccttctttcagccttgtctgttactactg 499
Query: 297 cccactccatctggtctaccagaaagtcttcgcatttactaggagctccaaactacagct 356
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 500 cccactccatctggtctaccagaaagtcttcacatttactaggagctccaaactacagct 559
Query: 357 gttcactaagtaagccttcactttgacccaggtgcttacaaacctcacgccatcttgtta 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gttcactaagtaagccttcactttgacccaggtgcttacaaacctcacgccatcttgtta 619
Query: 417 gttggtatttagtgaccattctcctggatgtaac 450
|||||||||||||| ||||| |||||||||||||
Sbjct: 620 gttggtatttagtggccattatcctggatgtaac 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 853
Length adjustment: 10
Effective length of query: 440
Effective length of database: 843
Effective search space: 370920
Effective search space used: 370920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_g24.g1 MSMg01no457_g24.g1 CHROMAT_FILE:
MSMg01no457_g24.g1 PHD_FILE: MSMg01no457_g24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:38 2005
(337 letters)
>mm_chr6_27760612_27761348
Length = 737
Score = 615 bits (318), Expect = e-180
Identities = 330/334 (98%)
Strand = Plus / Minus
Query: 1 tctggaatgaagtgtgccatttaaccagtgcatccaaagtccatggtgagggtactcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 tctggaatgaagtgtgccatttaaccagtgcatccaaagtccatggtgagggtactcatg 475
Query: 61 cttgcagatagaatgtgaaagcaaaagatgatgtgaaccattttatcatgtggttggaaa 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 474 cttgcagatagaatgtgaaagcaaaagatgatgtgaaccattttgtcatgtggttggaaa 415
Query: 121 tcatcctcatgggatatgttagaaggatctctataattgttgagagaaaggcttagtggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tcatcctcatgggatatgttagaaggatctctataattgttgagagaaaggcttagtggg 355
Query: 181 tcgattgcaggtgaacacactctgggtgatgaagaactatttgaacatagatcataatcc 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 354 tcgattgcaggtgaacacactctgggtgatgaagaagtatttgaacatagatcataatcc 295
Query: 241 tgtataaacatgctttggagatgatgaaaataaacctgtaaaaacctgagctcatttctc 300
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 294 tgtataaacatgcattggagatgatgaaaataaacctgtaaaaccctgagctcatttctc 235
Query: 301 atttcttttgtctcaagatgatgcaaatagacca 334
||||||||||||||||||||||||||||||||||
Sbjct: 234 atttcttttgtctcaagatgatgcaaatagacca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
