Query= MSMg01no457_h14.b1 MSMg01no457_h14.b1 CHROMAT_FILE:
MSMg01no457_h14.b1 PHD_FILE: MSMg01no457_h14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:41 2005
(271 letters)
>mm_chr6_95154834_95155505
Length = 672
Score = 456 bits (236), Expect = e-133
Identities = 259/270 (95%), Gaps = 7/270 (2%)
Strand = Plus / Minus
Query: 4 ggaattctctctctttc----agcctattggtctcactttcattttttgtcgaatgttga 59
||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ggaattctctctc---cagcaagcctattggtctcactttcattttttgtcgaatgttga 414
Query: 60 tctgagtttttaagccctagcgattcttgtgcctgtgtgcatcttcgaggtctgctttct 119
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tctgagtttttaagccatagcgattcttgtgcctgtgtgcatcttcgaggtctgctttct 354
Query: 120 ctgtgttaggagactcttgggtgcagggctgtccatgctgttacctttgcttgcctgcac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ctgtgttaggagactcttgggtgcagggctgtccatgctgttacctttgcttgcctgcac 294
Query: 180 tgttcaggggatcagatgtgactatataatgctgtggtttgtggctttcctcattgagga 239
|||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||
Sbjct: 293 tgttcaggggatcagatgtgacaagagaatgctgtggtttgtggctttcctcattgagga 234
Query: 240 ttgtcaggctccttaatttttctaaggagc 269
||||||||||||||||||||||||||||||
Sbjct: 233 ttgtcaggctccttaatttttctaaggagc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 271
Length of database: 672
Length adjustment: 9
Effective length of query: 262
Effective length of database: 663
Effective search space: 173706
Effective search space used: 173706
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no457_h14.g1 MSMg01no457_h14.g1 CHROMAT_FILE:
MSMg01no457_h14.g1 PHD_FILE: MSMg01no457_h14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:41 2005
(246 letters)
>mm_chr6_94967809_94968454
Length = 646
Score = 379 bits (196), Expect = e-110
Identities = 214/220 (97%)
Strand = Plus / Plus
Query: 26 cacccctgaatgctgtcagagagccttcagatgtccccatgtgttccgccatcgtgcctg 85
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 226 cacccctgaatgctgtcagagagccttcagatgtccccatgtgttccgccattgtgcctg 285
Query: 86 tactcattgtcattcatcaagacgcccgttctcatgtcagctcattcaatgtgacatttg 145
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 286 tactcattgtcattcatcaagacacccgttctcatgtcagctcattcaatgtgacatttg 345
Query: 146 ctttcactttcctttctggggcaaagtccttttgtttctcaggagtgccggttatggcat 205
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 346 ctttcactttcctttctggggcaaagtccttttgagcctcaggaatgccggttatggcat 405
Query: 206 aattattactgctttgagtaatatgccttggtgcattctg 245
||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 aattattactgctttgagtaatatgccttggtgcattctg 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
