NNTTTTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAA
TCCGCGGAATTCCATGAACTTATACGACTCAGACTGTACTGACATCATGA
ACTGAACTGAACTGAATAGAACTGCATGAAGGCCATTGAACTCAGCTGCA
TTCAACTGAACTGCATCAAACTGGGCTGAACTGCACTCATTGAAATGCCC
TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCACTCTCTCTCACTCACTCTCTTTTTTTTTTTCAAAGACACCAC
ACCACAAATACCCCCGCTGTTCTCCACACTAATGGAAATATACTATCTCT
GTACAACTCTATCAAATCTAATCTACCGAAATGTATCTTTGTCATAAATG
GAAACGCACCATACTACAAATCAACTTTACCTCCCTTTGTCCGAAATAAA
CAGTATTTAATAGTGTCTAGTCTGTATTGCATACTCAATACTCTATGTGT
CGGTATTTCAATATACACCACACCGACTTTGAAGCCCTTTGTTGATTAAT
CCTATTCAATATCTATCTCTCCTCCCTATCACACTTGACCATAATTGAAT
AAAATCTCTCTTGTATGCACAATATTATTTTTTTTTCACCATCCCTATCC
TCCCACAAATTACACAATCCTCATATGACACTTTTATACCTCGGATTCTA

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXTTTCGCGAAATTCCAAGCCTATCTGTCCTCCCAGGGGCTGTT
AGGTTGCTATTCTTCACAGCTACTCTCATGAGGCTGCTGCTTTGTTCCTT
TGATCTCACTGAAGACAGGTAGATGGTAGAACAATCTAAAATGTCATAAA
ATTTGATAATTCTTATTAATATTTAGTCATATTTTGGACATATACTTTTT
TGGGTTATTATAAGACTTTGGATAAATTTCTTTGATCAAGTTTCTGAGAA
GGCTAATTTGATTACTTTTCTTTTTTTTTTTTTCTTTTTTTTTTTTTTTT
TTTTTACAGTTTTCCGAGATAGCAATGTGCTGCTCAGGATTTACTGTTAG
CCTAACTCCAACTTTGAATTCCATCTAAACTGTGACATTTAGATATGCTG
AAAAACTACAAAATTTGAGCTGCTTAAAGTTATGAAAAAGGCAAAATTTT
TAATGACTCTAAGTAAAATTTTAAATGAGCTGGGCAGTGGTGGTGCACAC
CTTTAATCCCAGCACTTGGGAGGCAGAGTCTGGCAGATTTCTGAATTCGA
GGCCAGACTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGA
GAATCTCTGTCTCAAAAAAACACAAAGCATAAAACAAAAAAACAAACCCA
AAAATTTGAAAGATAGAAAAAGAGTGAGAGGGCCTAGCACACCTTTTATN

Query= MSMg01no458_c16.g1 MSMg01no458_c16.g1 CHROMAT_FILE:
MSMg01no458_c16.g1 PHD_FILE: MSMg01no458_c16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:40 2005
         (575 letters)



>mm_chr6_16596333_16597307
          Length = 975

 Score = 1050 bits (543), Expect = 0.0
 Identities = 567/575 (98%), Gaps = 1/575 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttccaagcctatctgtcctcccaggggctgttaggttgctattcttcacagctactctca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 ttccaagcctatctgtcctcccaggggctgttaggttgctattcttcacagctactctca 882

                                                                       
Query: 61  tgaggctgctgctttgttcctttgatctcactgaagacaggtagatggtagaacaatcta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 tgaggctgctgctttgttcctttgatctcactgaagacaggtagatggtagaacaatcta 822

                                                                       
Query: 121 aaatgtcataaaatttgataattcttattaatatttagtcatattttggacatatacttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 821 aaatgtcataaaatttgataattcttattaatatttagtcatattttggacatgtacttt 762

                                                                       
Query: 181 tttgggttattataagactttggataaatttctttgatcaagtttctgagaaggctaatt 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 761 tttgggttattataagactttggataaatttctttgatcaagtttctgagaaagctaatt 702

                                                                       
Query: 241 tgattacttttctttttttttttttctttttttttttttttttttttacagttttccgag 300
           ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 701 tgattacttttcttttttttttttt-tctttttttttttttttttttacagttttccgag 643

                                                                       
Query: 301 atagcaatgtgctgctcaggatttactgttagcctaactccaactttgaattccatctaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 atagcaatgtgctgctcaggatttactgttagcctaactccaactttgaattccatctaa 583

                                                                       
Query: 361 actgtgacatttagatatgctgaaaaactacaaaatttgagctgcttaaagttatgaaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 actgtgacatttagatatgctgaaaaactacaaaatttgagctgcttaaagttatgaaaa 523

                                                                       
Query: 421 aggcaaaatttttaatgactctaagtaaaattttaaatgagctgggcagtggtggtgcac 480
           |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 522 aggcaaaaattttaatgactttaagtaaaattttagatgagctgggcagtggtggtgcac 463

                                                                       
Query: 481 acctttaatcccagcacttgggaggcagagtctggcagatttctgaattcgaggccagac 540
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 462 acctttaatcccagcacttgggaggcagagtctgggagatttctgaattcgaggccagac 403

                                              
Query: 541 tggtctacagagtgagttccaggacagccagggct 575
           |||||||||||||||||||||||||||||||||||
Sbjct: 402 tggtctacagagtgagttccaggacagccagggct 368


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space:   545225
Effective search space used:   545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)