Query= MSMg01no458_c18.b1 MSMg01no458_c18.b1 CHROMAT_FILE:
MSMg01no458_c18.b1 PHD_FILE: MSMg01no458_c18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:41 2005
(664 letters)
>mm_chr6_93193813_93194876
Length = 1064
Score = 1236 bits (639), Expect = 0.0
Identities = 657/663 (99%), Gaps = 1/663 (0%)
Strand = Plus / Plus
Query: 3 gaattccatggcttttaccgtactcatcatgttgtacaaccctcacattctttagtttct 62
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattccatggcttttattgtactcatcatgttgtacaaccctcacattctttagtttct 262
Query: 63 ttggtttgaatttcttatggcctcagggatattccacacaccctcttcctcttccctttg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttggtttgaatttcttatggcctcagggatattccacacaccctcttcctcttccctttg 322
Query: 123 caaacacagtctttcagcctcaatgatgtatctattctagatgagttaaataaaaagtca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 caaacacagtctttcagcctcaatgatgtatctattctagatgagttaaataaaaagtca 382
Query: 183 tgcattatgtgatttgtgtctgtttttcactagagtattttcaagtttcatccataagta 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgcattatgtgatttgtgtctgtttttcactagagtattttcaagtttcatccataagta 442
Query: 243 ctccatccctttttgtggttatataatatttcactttgtgttcatagcaaaatgtgctta 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ctccatccctttttgtggttatataatatttcactttgtgttcatagcaaaatgtgctta 502
Query: 303 cctgtttactttttgatagatgcaagcattggtctttttgcctctgagctatgattagta 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cctgtttactttttgatagatgcaagcattggtctttttgcctctgagctatgattagta 562
Query: 363 aatgatgttataaacgttcttgtataaatttctatgcaagcaaatgctttcatttccctt 422
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aatgatgttataaaagttcttgtataaatttctatgcaagcaaatgctttcatttccctt 622
Query: 423 ggatgtagaaataggggagaaaatgctgggtcatattctgtttttgatgtttaaaatttt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ggatgtagaaataggggagaaaatgctgggtcatattctgtttttgatgtttaaaatttt 682
Query: 483 ttttt-attctttgaaagcttcatatagtgatacaatgtatataaaccacgttcatccac 541
||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 683 ttttttattccttgaaagcttcatatattgatacaatgtatataaaccacgttcatccac 742
Query: 542 cactacctccctgcaactatccccagtcctttccatcctatttctctcccaacttcatgt 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 cactacctccctgcaactatccccagtcctttccatcctatttctctcccaacttcatgt 802
Query: 602 ccttttcaaacttttttttctttaattaataatcccctatgtctagtcagtgtctgtatg 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 ccttttcaaacttttttttctttaattaataatcccctatgtctagtcagtgtctgtatg 862
Query: 662 aat 664
|||
Sbjct: 863 aat 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_c18.g1 MSMg01no458_c18.g1 CHROMAT_FILE:
MSMg01no458_c18.g1 PHD_FILE: MSMg01no458_c18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:41 2005
(564 letters)
>mm_chr6_93350743_93351706
Length = 964
Score = 569 bits (294), Expect = e-166
Identities = 303/306 (99%)
Strand = Plus / Minus
Query: 1 acatatacatataggaggatggtgaccattgagtgatgttggaaagatggcttccaaacc 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 506 acatatacatataggaggatggtgaccatttagtgatgttggaaagatggcttccaaacc 447
Query: 61 agatatcagaagaatgagatcttttggagactgaaactcacttcaaagggagttttaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 agatatcagaagaatgagatcttttggagactgaaactcacttcaaagggagttttaaaa 387
Query: 121 aacataacaaaacaacaacaccacccctttggcatgtgcctaaagagaagccttggagtg 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aacataacaaaacaacaacaacacccctttggcatgtgcctaaagagaagccttggagtg 327
Query: 181 tctgtggagtggctaggctgttttctttttatgttgggctttcactatttttctgggtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 326 tctgtggagtggctaggctgttttctttttatgttgggctttcactatttttctgagtgg 267
Query: 241 tactactctctggctggccatgaaattagcagagttctgaggtgtgacctttgaaacaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tactactctctggctggccatgaaattagcagagttctgaggtgtgacctttgaaacaag 207
Query: 301 attttc 306
||||||
Sbjct: 206 attttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space: 528516
Effective search space used: 528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
