Query= MSMg01no458_e16.b1 MSMg01no458_e16.b1 CHROMAT_FILE:
MSMg01no458_e16.b1 PHD_FILE: MSMg01no458_e16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:50 2005
(202 letters)
>mm_chr6_79205250_79205853
Length = 604
Score = 344 bits (178), Expect = 2e-99
Identities = 195/202 (96%), Gaps = 6/202 (2%)
Strand = Plus / Minus
Query: 5 gaattctttcat--atgccaatatagcagaaaactttttgtgatctaaaaaaagtttctg 62
|||||||||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gaattctttcataaagg--aatatagcagaaaactttttgtgatctaaaaaaagtttctg 347
Query: 63 ttctttttctgctgcttaagtatggaagagttcagtccccagagtatgctttaaatgtat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ttctttttctgctgcttaagtatggaagagttcagtccccagagtatgctttaaatgtat 287
Query: 123 tgtgttgtgtggattcctctaatcttacctttatcaccagatatctaggaagtt-ctata 181
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 286 tgtgttgtgtggattcctctaatcttacctttatcaccagatatctaggaagttcctata 227
Query: 182 tagtt-ttgacactcaagtcaa 202
||||| ||||||||||||||||
Sbjct: 226 tagttattgacactcaagtcaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 202
Length of database: 604
Length adjustment: 8
Effective length of query: 194
Effective length of database: 596
Effective search space: 115624
Effective search space used: 115624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no458_e16.g1 MSMg01no458_e16.g1 CHROMAT_FILE:
MSMg01no458_e16.g1 PHD_FILE: MSMg01no458_e16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:50 2005
(638 letters)
>mm_chr6_79033826_79034863
Length = 1038
Score = 1096 bits (567), Expect = 0.0
Identities = 622/641 (97%), Gaps = 5/641 (0%)
Strand = Plus / Plus
Query: 1 catgtagattgtgaaagtataatgatgtgcctaacaagaaatgtgttccaagttaagttg 60
|||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 catgtagattatgaaagtagaatgatgtgcctaacaagaaatttgttccaagttaagttg 260
Query: 61 gtgcagaacttcttggctgga-gtttatgttctctatcatgctgcatccataaaagtcca 119
||||||| |||||||||| || |||||||| |||||||||||||||||||||||||||||
Sbjct: 261 gtgcagagcttcttggct-gacgtttatgtgctctatcatgctgcatccataaaagtcca 319
Query: 120 agattcaagtttagctgacatcacagaatcaaggaacctggaaggagacttggcagaagt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agattcaagtttagctgacatcacagaatcaaggaacctggaaggagacttggcagaagt 379
Query: 180 ggtagggcagccagggattcacaaacccaaagacatactagaaactagccttgaatacta 239
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 380 ggtagggcagccagggattcacaaacccaaagacatactagaaactagctttgaatacta 439
Query: 240 agccaaa-tnatgngtttattataaaatccttataaactctgtttaataacatattacta 298
||||||| | | | ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 440 agccaaagtaa-gtgtttattataaaatccttataaattctgtttaataacatattacta 498
Query: 299 agtagaatattttattactagaatgcatatataagacctatagcatgtgaaagattgcct 358
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agtagaatattttattactggaatgcatatataagacctatagcatgtgaaagattgcct 558
Query: 359 tgaggctgcagagattgttctgtggacaagagtgcatactattcttctggatgacccaat 418
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 559 tgaggctgcagagattgttctgtggacaagattgcatactgttcttctggatgacccaat 618
Query: 419 ttgagagccagaccatcaacttagaatacccaagatataagatacaatttgcaaa-caca 477
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 619 ttgagagccagaccatcaacttaggatacccaagatataagatacaatttgcaaaacaca 678
Query: 478 tgaaactcaagaagaacgaagaccaaagtgtggacactttgccccttcttagaataggaa 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tgaaactcaagaagaacgaagaccaaagtgtggacactttgccccttcttagaataggaa 738
Query: 538 acaaaacacccatggaaggagttacagagacaaagtttggagctgagacaaaaggatgga 597
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 acaaaacacccatggaaagagttacagagacaaagtttggagctgagacaaaaggatgga 798
Query: 598 ccatctagagactgccatacccggtgatccatcccataatc 638
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ccatctagagactgccatacccggtgatccatcccataatc 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
